Job Description P37353 Confidence 100.00% Date Thu Jan 5 11:55:31 GMT 2012 Rank 17 Aligned Residues 439 % Identity 21% Template c2v7bB_ PDB info PDB header:ligase Chain: B: PDB Molecule:benzoate-coenzyme a ligase; PDBTitle: crystal structures of a benzoate coa ligase from2 burkholderia xenovorans lb400 Resolution 1.84 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	F	S	D	W	P	W	R	H	W	R	Q	V	R	G	E	T	I	A	L	R	L	N	D	E	Q	L	N	W	R	E	L	C	A	R	V	D	E	L	A	S	G	F	A	V	Q	G	V	V	E	G	S	G	V	M	L	R	A	W	N	T	P	Q	T	L	L	A	W	L	A	L	L	Q	C	G	A	R	V	L
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		F	N	F	A	A	.	Y	L	F	R	L	N	E	T	R	A	G	K	T	A	Y	I	D	D	T	G	S	T	T	Y	G	E	L	E	E	R	A	R	R	F	A	S	A	L	R	T	L	G	V	H	P	E	E	R	I	L	L	V	M	L	D	T	V	A	L	P	V	A	F	L	G	A	L	Y	A	G	V	V	P	V
Template Known Secondary structure							.						T	G	G	G	T	T	S						S	S																						T	T			T	T									S	S	T													T
Template Predicted Secondary structure							.
Template SS confidence
		23	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.															.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	N	P	Q	L	P	Q	P	L	L	E	E	L	L	P	N	L	T	L	Q	F	A	L	V	P	D	G	E	N	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	L	T	S	L	H	I	Q	L	V	E	G	A	H	A	A	T	W	Q	P	T	R	L	C	S	M	T	L	T	S	G	S	T
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	N	T	L	L	T	P	A	D	Y	V	Y	M	L	T	H	S	H	A	R	A	V	I	A	S	G	A	L	V	Q	N	V	T	Q	A	L	E	S	A	G	C	Q	L	I	V	S	Q	P	L	A	P	L	F	E	E	L	I	D	A	A	A	P	A	A	K	A	A	A	T	G	C	D	D	I	A	F	W	L	Y
Template Known Secondary structure					T	T														T		S						G	G	G																								B								S				S	S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																																																.	.	.	.	.	.
Query SS confidence																			.																																																.	.	.	.	.	.
Query Sequence		G	L	P	K	A	A	V	H	T	Y	Q	A	H	L	A	S	A	.	Q	G	V	L	S	L	I	P	F	G	D	H	D	D	W	L	L	S	L	P	L	F	H	V	S	G	Q	G	I	M	W	R	W	L	Y	A	G	A	R	M	T	V	R	D	K	Q	P	.	.	.	.	.	.	L	E	Q	M	L	A	G	C	T
Query Conservation																			.																																																.	.	.	.	.	.
Alig confidence																			.																																																.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	P	K	G	T	V	H	T	H	A	N	L	Y	W	T	A	E	L	Y	A	K	P	I	L	G	I	A	E	N	D	V	V	F	S	A	A	K	L	F	F	A	Y	G	L	G	N	G	L	T	F	P	L	S	V	G	A	T	A	I	L	M	A	E	R	P	T	A	D	A	I	F	A	R	L	V	E	H	R	P
Template Known Secondary structure																					T									T	T						S	S		T	T	S								T							T								S														T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290
Predicted Secondary structure																			.	.	.	.	.	.																									.																												.	.
Query SS confidence																			.	.	.	.	.	.																									.																												.	.
Query Sequence		H	A	S	L	V	P	T	Q	L	W	R	L	L	V	N	R	S	.	.	.	.	.	.	S	V	S	L	K	A	V	L	L	G	G	A	A	I	P	V	E	L	T	E	Q	A	R	E	.	Q	G	I	R	C	F	C	G	Y	G	L	T	E	F	A	S	T	V	C	A	K	E	A	D	G	L	A	.	.	D	V	G
Query Conservation																			.	.	.	.	.	.																									.																												.	.
Alig confidence																			.	.	.	.	.	.																									.																												.	.
Template Conservation
Template Sequence		T	V	F	Y	G	V	P	T	L	Y	A	N	M	L	V	S	P	N	L	P	A	R	A	D	V	A	I	R	I	C	T	S	A	G	E	A	L	P	R	E	I	G	E	R	F	T	A	H	F	G	C	E	I	L	D	G	I	G	S	T	E	M	L	H	I	F	L	S	N	R	A	G	A	V	E	Y	G	T	T	G
Template Known Secondary structure		S														T		T	T				G	G	G										S	S															S										T	T	T	S	S							T	T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.												.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.																																						.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.																																						.
Query Sequence		S	P	L	P	G	R	E	V	K	I	V	N	N	E	.	.	.	.	.	.	.	.	.	.	.	V	W	L	R	A	A	S	M	A	E	G	Y	W	R	N	G	Q	L	V	S	L	V	N	D	E	G	W	Y	A	T	R	D	R	G	E	M	H	.	N	G	K	L	T	I	V	G	R	L	D	N	L	F	F	S	G
Query Conservation																.	.	.	.	.	.	.	.	.	.	.																																						.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																																						.																.	.
Template Conservation																																																																																.	.
Template Sequence		R	P	V	P	G	Y	E	I	E	L	R	D	E	A	G	H	A	V	P	D	G	E	V	G	D	L	Y	I	K	G	P	S	A	A	V	M	Y	W	N	N	R	E	K	S	R	A	T	F	L	G	E	W	I	R	S	G	D	K	Y	C	R	L	P	N	G	C	Y	V	Y	A	G	R	S	D	D	M	L	K	.	.
Template Known Secondary structure					T	T								T	T	S		B			T	T	S									T	T					B	T	T											T	T												T	T	S								G	G	G		B		.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.								.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure																																															.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.
Query Sequence		G	E	G	I	Q	P	E	E	V	E	R	V	I	A	A	H	P	A	V	L	Q	V	F	I	V	P	V	A	D	K	E	F	G	H	R	P	V	A	V	M	E	Y	D	H	E	.	.	.	.	.	.	.	S	V	D	L	S	E	W	V	K	D	K	L	A	R	F	Q	Q	P	V	R	W	L	T	L	P	P	E	L
Query Conservation																																															.	.	.	.	.	.	.
Alig confidence		.	.																																	.											.	.	.	.	.	.	.
Template Conservation		.	.																																	.
Template Sequence		.	.	Y	V	S	P	V	E	V	E	M	V	L	V	Q	H	D	A	V	L	E	A	A	V	V	G	V	D	H	G	G	L	V	K	.	T	R	A	F	V	V	L	K	R	E	F	A	P	S	E	I	L	A	E	E	L	K	A	F	V	K	D	R	L	A	P	H	K	Y	P	R	D	I	V	F	V	D	D	L	P
Template Known Secondary structure		.	.		B										T	T	S	T	T												T	T				.									T	T																	T	T	S		T	T	S	S		S						S
Template Predicted Secondary structure		.	.																																	.
Template SS confidence
				438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	G	G	I	K	I	S	R	Q	A	L	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	A	T	G	K	I	Q	R	F	K	L	R	E
Template Known Secondary structure		B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		515	.	.	.	.	520	.	.	.	.	.	.	.	.