Job Description P37686 Confidence 100.00% Date Thu Jan 5 11:57:01 GMT 2012 Rank 14 Aligned Residues 324 % Identity 22% Template c3uhjE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:probable glycerol dehydrogenase; PDBTitle: crystal structure of a probable glycerol dehydrogenase from2 sinorhizobium meliloti 1021 Resolution 2.34 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	F	I	P	S	V	N	V	I	G	A	D	S	L	T	D	A	M	N	M	M	A	D	Y	G	F	T	R	T	L	I	V	T	D	N	M	L	T	K	L	G	M	A	G	D	V	Q	K	A	L	E	E	R	N	I	F	S	V	I	Y	D	G	T	Q	P	N	P	T	T	E	N	V	A	A	G	L	K	L	L
Query Conservation
Alig confidence																												.															.	.	.	.	.	.	.	.	.
Template Conservation																												.															.	.	.	.	.	.	.	.	.
Template Sequence		A	F	G	G	P	N	K	Y	I	Q	R	A	G	E	I	D	K	L	A	A	Y	L	A	P	L	G	.	K	R	A	L	V	L	I	D	R	V	L	F	D	A	.	.	.	.	.	.	.	.	.	L	S	E	R	I	S	L	D	I	R	F	E	R	F	G	G	E	C	C	T	S	E	I	E	R	V	R	K	V	A
Template Known Secondary structure							S						T	T	G	G	G	G						T	T	T		.	S								G	G	G				.	.	.	.	.	.	.	.	.																S
Template Predicted Secondary structure																												.															.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.										.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	N	N	C	D	S	V	I	S	L	G	G	G	S	P	H	D	C	A	K	G	I	A	L	V	A	A	N	G	G	D	I	R	D	Y	E	G	V	D	R	S	A	K	P	Q	L	P	M	I	A	I	N	T	T	A	G	T	A	S	E	M	T	R	F	C	I	I	T	D	E	A	R	H	I	K	M	A	I	V
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Sequence		I	E	H	G	S	D	I	L	V	G	V	G	G	G	K	T	A	D	T	A	K	I	V	A	I	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	R	I	V	I	A	P	T	I	A	S	T	D	A	P	C	S	A	I	A	V	R	Y	T	E	.	H	G	V	Y	E	E	A	L
Template Known Secondary structure					T		S						S	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								S	S				S	T	T	T		S							T	.	T	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.											.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	H	V	T	P	L	L	S	V	N	D	S	S	L	M	I	G	M	P	K	S	L	T	A	A	T	G	M	D	A	L	T	H	A	I	E	A	Y	V	S	I	A	A	.	.	.	.	.	.	.	.	.	.	T	P	I	T	D	A	C	A	L	K	A	V	T	M	I	A	E	N	L	P	L	A	V	E	D	G
Query Conservation																																														.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	P	R	N	P	D	A	V	V	V	D	S	A	L	V	A	A	A	P	A	R	F	L	V	A	G	I	G	D	A	L	S	T	W	F	E	A	R	S	N	I	E	S	R	T	D	N	A	G	G	F	P	A	T	E	A	G	X	A	I	A	R	H	C	Q	D	V	L	T	R	D	A	V	K	A	K	I	A	V
Template Known Secondary structure				S	S			S											T	S													T													T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		235	.					.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.																																				.	.	.
Query SS confidence				.	.	.	.																																				.	.	.
Query Sequence		S	N	.	.	.	.	A	K	A	R	E	A	M	A	Y	A	Q	F	L	A	G	M	A	F	N	N	A	S	L	G	Y	V	H	A	M	A	H	Q	L	G	G	.	.	.	F	Y	N	L	P	H	G	V	C	N	A	V	L	L	P	H	V	Q	V	F	N	S	K	V	A	A	A	R	L	R	D	C	A	A	A	M
Query Conservation				.	.	.	.																																				.	.	.
Alig confidence				.	.	.	.																																				.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	G	L	L	T	P	A	V	E	N	I	I	E	A	N	T	L	L	S	G	L	G	F	E	N	C	G	C	S	A	A	H	G	I	H	D	G	L	T	V	L	E	E	V	H	G	Y	F	H	G	E	K	V	A	F	G	T	L	C	L	L	X	L	E	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T														T																							T	T	S	G	G	G	T	T	S																	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.				.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																									.	.	.																	.
Query SS confidence																																									.	.	.																	.
Query Sequence		G	V	N	V	T	G	K	N	D	A	E	G	A	E	A	C	I	N	A	I	R	E	L	A	K	K	V	D	I	P	A	G	L	R	D	L	N	V	K	.	.	.	E	E	D	F	A	V	L	A	T	N	A	L	K	D	A	C	.	G	F	T	N	P	I	Q	A	T	H	E	E	I	V	A	I	Y	R	A	A
Query Conservation																																									.	.	.																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	R	A	E	I	E	A	X	I	R	F	C	R	S	V	G	L	P	T	K	L	A	D	L	G	I	V	D	D	V	P	A	K	I	G	R	V	A	E	A	A	C	R	P	G	N	I	I	Y	A	T	P	V	T	I	T	V	P	A	V	R	D	A	I	L	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.														T	T	T				S	G	G	G	G	T			S	S													T	S	T	T		G	G	G	G	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions