Job Description P37686 Confidence 96.87% Date Thu Jan 5 11:57:01 GMT 2012 Rank 29 Aligned Residues 91 % Identity 19% Template c3rggD_ PDB info PDB header:lyase Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase, pure protein; PDBTitle: crystal structure of treponema denticola pure bound to air Resolution 1.82 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		R	T	L	I	V	T	D	N	M	L	T	K	L	G	M	A	G	D	V	Q	K	A	L	E	E	R	N	I	F	S	V	I	Y	D	G	T	Q	P	N	P	T	T	E	N	V	A	A	G	L	K	L	L	K	E	N	N	.	C	D	S	V	I	S	L	G	G	G	S	P	H	D	C	A	K	G	I	A	L	V	A
Query Conservation																																																										.
Alig confidence									.																											.																						.														.
Template Conservation									.																											.																																				.
Template Sequence		L	V	I	I	L	M	G	.	S	S	S	D	M	G	H	A	E	K	I	A	S	E	L	K	T	F	G	I	E	Y	A	I	R	I	.	G	S	A	H	K	T	A	E	H	V	V	S	M	L	K	E	Y	E	A	L	D	R	P	K	L	Y	I	T	I	A	G	R	S	N	A	.	L	S	G	F	V	D	G	F	V
Template Known Secondary structure								S	.	S	G	G	G														T	T								.			T	T	T														T	S	S	S										S	S			.									S
Template Predicted Secondary structure									.																											.																																				.
Template SS confidence
		4	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	G	G	D	I	R	D	Y	E	G	V	D	R	S	A	K	P	Q	L	P	M	I	A	I	N	T	T	A	G	T	A	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	A	T	I	A	C	P	P	P	S	D	S	F	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S											G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				81	.	.	.	.	.	.	.	.	90	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions