 |
Job Description | P37686 | Confidence | 42.34% | Date | Thu Jan 5 11:57:01 GMT 2012 |
Rank | 211 | Aligned Residues | 83 |
% Identity | 13% | Template | c3rfoA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:methionyl-trna formyltransferase; |
PDBTitle: crystal structure of methyionyl-trna formyltransferase from bacillus2 anthracis
|
Resolution | 2.40 Å |
|
 |
  |   |
12 | . | . | . | . | . | . | . | |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
|
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  | . | . | . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | V | I | G | A | D | S | L | . |
T | D | A | M | N | M | M | A | D | Y | G | F | T | R | T | L | I | V | T | D | N | . |
. |
. |
. |
M | L | T | K | L | G | M | A | G | D | V | Q | K | A | L | E | E | R | N | I | F | S | V | I | Y | D | G | T | Q | P | N | P | T | T | E | N | V | A | A | G | L | K | L | L | K | E |
Query Conservation |   |
|   |   |
|   |   |   |
| . |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
V | F | X | G | T | P | D | F | S | V | P | V | L | R | R | L | I | E | D | G | Y | D | V | I | G | V | V | T | Q | P | D | R | P | V | G | R | K | K | V | L | T | P | T | P | V | K | V | E | A | E | K | H | G | I | P | V | L | Q | P | L | R | I | R | E | . |
. |
. |
. |
. |
. |
. |
K | D | E | Y | E | K | V | L | A |
Template Known Secondary structure |   |
 |  |  |
|
| S | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
|
|
|
|
|  |  | T | T | T | T |  |  |
|
|
|  |  |  |  |  |  |  |  | T | T |
|
|  |  |
|
| S |
| T | T | S | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 70 | . | . | . | . | . | . | . |
  |
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | N | C | D | S | V | I | S | L | G | G | G | S | P | H |
Query Conservation |   |
  |   |   |
|   |
|
|
|
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |
|   |   |   |   |   |   |
|
|
Template Sequence |   |
L | E | P | D | L | I | V | T | A | A | F | G | Q | I | V |
Template Known Secondary structure |   |
 |
|
| S |  |  |  |  | S | S |
|
| S |
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|