Job Description P37686 Confidence 65.16% Date Thu Jan 5 11:57:01 GMT 2012 Rank 137 Aligned Residues 74 % Identity 23% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		T	R	T	L	I	V	T	D	N	M	L	T	K	L	G	M	A	G	D	V	Q	K	A	L	E	E	R	N	I	F	S	V	I	Y	D	G	T	Q	P	N	P	T	T	E	N	V	A	A	G	L	K	L	L	K	E	N	N	C	D	S	V	I	S	.	.	.	L	G	G	G	S	P	H	D	C	A	K	G	I	A
Query Conservation																																																																	.	.	.
Alig confidence													.	.	.	.																						.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation													.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	I	L	V	V	D	D	D	A	S	.	.	.	.	L	A	E	M	L	T	I	V	L	R	G	E	G	F	D	T	A	V	I	G	D	.	.	.	.	.	.	.	.	.	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	M	L	P	G	M	N	G	I	D	V	C	R	V	L	R
Template Known Secondary structure									S				.	.	.	.												T	T									.	.	.	.	.	.	.	.	.	G	G	G											S						S	S		S	S	S
Template Predicted Secondary structure													.	.	.	.																						.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.										.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	A	A	N	G	G	D	I	R	D	Y	E	G	V	D	R	S	A	K	P	Q	L	P	M	I	A	I
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	G	V	P	I	V	M	L
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		73																			.	.	.	.	.	.	80	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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