Job Description P37686 Confidence 45.71% Date Thu Jan 5 11:57:01 GMT 2012 Rank 199 Aligned Residues 84 % Identity 12% Template c3jpyA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:glutamate [nmda] receptor subunit epsilon-2; PDBTitle: crystal structure of the zinc-bound amino terminal domain of the nmda2 receptor subunit nr2b Resolution 3.21 Å

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		9	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		P	S	V	N	V	I	G	A	D	S	L	.	.	.	T	D	A	M	N	M	M	A	D	Y	G	F	T	R	T	L	I	V	T	D	N	M	L	T	K	L	G	M	A	G	D	V	Q	K	A	L	E	E	R	N	I	F	S	V	I	Y	D	G	T	Q	P	N	P	T	T	E	N	V	A	A	G	L	K	L	L	K
Query Conservation													.	.	.
Alig confidence													.	.	.																																																									.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		S	M	F	F	Q	F	G	P	S	I	E	Q	Q	A	S	V	M	L	N	I	M	E	E	Y	D	W	Y	I	F	S	I	V	T	T	Y	F	P	G	Y	Q	D	F	V	N	K	I	R	S	T	I	E	N	S	F	V	G	W	E	L	E	E	V	L	L	L	D	M	S	S	K	.	.	.	.	I	Q	N	Q	L	K
Template Known Secondary structure							S	S																	T	T										S	S	T	T														T		S	S															T	.	.	.	.						T
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	N	C	D	S	V	I	S	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	Q	S	P	I	I	L	L	Y	C
Template Known Secondary structure		T				S						S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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