Return to main results Retrieve Phyre Job Id

Job DescriptionP37686
Confidence26.75%DateThu Jan 5 11:57:01 GMT 2012
Rank333Aligned Residues112
% Identity15%Templatec3eezA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:putative mandelate racemase/muconate lactonizing PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing enzyme from silicibacter pomeroyi
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90.........100.........110.....
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  IVTDNMLTKLGMAGDVQKALEERNIFSVIYDGTQPNPTTENVAAGLKLLKENNCDSVISLGGGSPHDCAKGIALVAANGG
Query Conservation 

             
   
    
                
            
 







  
 

  
       
Alig confidence 









...

















.















































Template Conservation 

 


    ...      
     
 
  
.    



        
   
            
   
  



  
 
Template Sequence  VSVDECLVTL. . . QDAARVARDGLAEVFGIK. LNRVGGLTRAARMRDIALTHGIDMFVMATGGSVLADAEALHLAATIPD
Template Known Secondary structure 
TT

S...TT

S.TSTT

SS
STS
G
Template Predicted Secondary structure 





...





.
















Template SS confidence 















































































   238.240....... ..250.........260..... ....270.........280.........290.........300.........310...
 
   116...120.........130... ......140.........150.
Predicted Secondary structure  .......











....











Query SS confidence  . . . . . . .

















. . . .

















Query Sequence  . . . . . . . DIRDYEGVDRSAKPQLPM. . . . IAINTTAGTASEMTRFCI
Query Conservation  .......                
 ....
 



  



 
  

Alig confidence  .......

















....

















Template Conservation      
                      
 
 

  





 
   
Template Sequence  HACHAVWACQDMLTVDIAGGRGPRNIDGHLHLPETPGLGVHPDEDAL
Template Known Secondary structure  GGB

B

SGGGBS

TTTT
SS

BTT



SSBTS



TTSS
Template Predicted Secondary structure 


































Template SS confidence 














































   314.....320.........330.........340.........350.........360
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions