Job Description P37686 Confidence 100.00% Date Thu Jan 5 11:57:01 GMT 2012 Rank 15 Aligned Residues 325 % Identity 19% Template c3ce9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol dehydrogenase; PDBTitle: crystal structure of glycerol dehydrogenase (np_348253.1) from2 clostridium acetobutylicum at 2.37 a resolution Resolution 2.37 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	F	F	I	P	S	V	N	V	I	G	A	D	S	L	T	D	A	M	N	M	M	A	D	Y	G	F	T	R	T	L	I	V	T	D	N	M	L	T	K	L	G	M	A	G	D	V	Q	K	A	L	E	E	R	N	I	F	S	V	I	Y	D	G	T	Q	P	N	P	T	T	E	N	V	A	A	G	L	K	L
Query Conservation
Alig confidence																																												.																																					.
Template Conservation																																												.																																					.
Template Sequence		H	R	I	A	I	P	L	I	L	E	V	G	N	N	K	I	Y	N	I	G	Q	I	I	K	K	G	N	F	K	R	V	S	L	Y	F	G	E	G	I	Y	E	L	.	F	G	E	T	I	E	K	S	I	K	S	S	N	I	E	I	E	A	V	E	T	V	K	N	I	D	F	D	E	I	G	T	N	A	F	K	.
Template Known Secondary structure								S						S	S		G	G	G						G	G	G	T		S								T	T					.											T	T	T													B									T	T	.
Template Predicted Secondary structure																																												.																																					.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	E	N	N	C	D	S	V	I	S	L	G	G	G	S	P	H	D	C	A	K	G	I	A	L	V	A	A	N	G	G	D	I	R	D	Y	E	G	V	D	R	S	A	K	P	Q	L	P	M	I	A	I	N	T	T	A	G	T	A	S	E	M	T	R	F	C	I	I	T	D	E	A	R	H	I	K	M	A	I
Query Conservation
Alig confidence		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	I	P	A	E	V	D	A	L	I	G	I	G	G	G	K	A	I	D	A	V	K	Y	X	A	F	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	P	F	I	S	V	P	T	S	T	S	N	D	G	F	S	S	P	V	A	S	L	L	I	N	G	K	R	T	S	V	P	A
Template Known Secondary structure		.	S		T	T									S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								S			S	S	G	G	G	T	S	S							T	T
Template Predicted Secondary structure		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.
Query SS confidence																																										.	.	.	.	.
Query Sequence		V	D	K	H	V	T	P	L	L	S	V	N	D	S	S	L	M	I	G	M	P	K	S	L	T	A	A	T	G	M	D	A	L	T	H	A	I	E	A	Y	.	.	.	.	.	V	S	I	A	A	T	P	I	T	D	A	C	A	L	K	A	V	T	M	I	A	E	N	L	P	L	A	V	E	D	G	S	N	A	K
Query Conservation																																										.	.	.	.	.
Alig confidence				.	.	.	.																																			.	.	.	.	.
Template Conservation				.	.	.	.
Template Sequence		K	T	.	.	.	.	P	D	G	I	V	V	D	I	D	V	I	K	G	S	P	E	K	F	I	Y	S	G	I	G	D	L	V	S	N	I	T	A	L	Y	D	W	K	F	E	E	E	N	H	K	S	I	I	D	D	F	A	V	X	I	S	K	K	S	V	N	S	F	V	R	T	D	F	K	S	I	K	D	E	V
Template Known Secondary structure				.	.	.	.		S											T	S																												T	T	S																								S		T	T
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		145	.					.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																							.	.	.	.	.																		.	.
Query SS confidence																							.	.	.	.	.																		.	.
Query Sequence		A	R	E	A	M	A	Y	A	Q	F	L	A	G	M	A	F	N	N	A	S	L	.	.	.	.	.	G	Y	V	H	A	M	A	H	Q	L	G	G	F	Y	N	L	P	.	.	H	G	V	C	N	A	V	L	L	P	H	V	Q	V	F	N	S	K	V	A	A	A	R	L	R	D	C	A	A	A	M	G	V	N	V
Query Conservation																							.	.	.	.	.																		.	.
Alig confidence																							.	.	.	.	.																		.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	L	K	E	L	V	D	S	L	T	X	N	G	I	A	X	E	I	A	G	N	S	S	P	A	S	G	A	E	H	L	I	S	H	A	L	D	K	F	L	P	N	P	Q	L	H	G	I	Q	V	G	V	A	T	Y	I	X	S	K	V	H	K	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																					T	S	S	T	T	T		S														S	S																				T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.			.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		T	G	K	N	D	A	E	G	A	E	A	C	I	N	A	I	R	E	L	A	K	K	V	D	I	P	A	G	L	R	D	L	N	V	K	E	E	D	F	A	V	L	A	T	N	A	L	.	.	K	D	A	C	G	F	T	N	P	I	Q	A	T	H	E	E	I	V	A	I	Y	R	A
Query Conservation																																																	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	E	E	R	I	K	K	I	L	S	D	T	G	F	F	N	Y	V	K	G	L	N	X	K	K	S	D	F	K	R	A	I	S	E	A	H	L	I	K	P	A	R	Y	T	Y	L	H	V	E	K	N	C	E	T	A	K	E	I	V	D	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.											T	T							T	T																		S	T	T	S			G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions