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Job DescriptionP37686
Confidence100.00%DateThu Jan 5 11:57:01 GMT 2012
Rank2Aligned Residues381
% Identity49%Templatec3bfjK_
PDB info PDB header:oxidoreductaseChain: K: PDB Molecule:1,3-propanediol oxidoreductase; PDBTitle: crystal structure analysis of 1,3-propanediol oxidoreductase
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AASTFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDNMLTKLGMAGDVQKALEERNIFSVIYDGTQPNPTTENVAAGL
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Template Sequence  RMFDYLVPNVNFFGPNAISVVGERCQLLGGKKALLVTDKGLRKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGL
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SSTTGGGGTT
S
TTT


SSTT




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B
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  KLLKENNCDSVISLGGGSPHDCAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCIITDEARHIKM
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Template Sequence  AVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTASEVTRHCVLTNTETKVKF
Template Known Secondary structure  TT

STTSSS
SGGG
BSS


S





SS

GGG
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  AIVDKHVTPLLSVNDSSLMIGMPKSLTAATGMDALTHAIEAYVSIAATPITDACALKAVTMIAENLPLAVEDGSNAKARE
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Template Sequence  VIVSWRNLPSVSINDPLLMIGKPAALTAATGMDALTHAVEAYISKDANPVTDAAAMQAIRLIARNLRQAVALGSNLQARE
Template Known Secondary structure 
GGGS
S
GGGTTT

STT


TT
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   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  AMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYNLPHGVCNAVLLPHVQVFNSKVAAARLRDCAAAMGVNVTGKNDAEGAE
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Template Sequence  YMAYASLLAGMAFNNANLGYVHAMAHQLGGLYDMPHGVANAVLLPHVARYNLIANPEKFADIAELMGENITGLSTLDAAE
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GGG
TT


TT

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   246...250.........260.........270.........280.........290.........300.........310.........320.....
 
   322.......330.........340.........350.........360.........370.........380..
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Query Sequence  ACINAIRELAKKVDIPAGLRDLNVKEEDFAVLATNALKDACGFTNPIQATHEEIVAIYRAA
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Template Sequence  KAIAAITRLSMDIGIPQHLRDLGVKETDFPYMAEMALKDGNAFSNPRKGNEQEIAAIFRQA
Template Known Secondary structure  TT



GGGGT

GGGSGGGGG
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   326...330.........340.........350.........360.........370.........380......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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