Job Description P37686 Confidence 100.00% Date Thu Jan 5 11:57:01 GMT 2012 Rank 17 Aligned Residues 291 % Identity 16% Template c1xahA_ PDB info PDB header:lyase Chain: A: PDB Molecule:3-dehydroquinate synthase; PDBTitle: crystal structure of staphlyococcus aureus 3-dehydroquinate2 synthase (dhqs) in complex with zn2+ and nad+ Resolution 2.20 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	S	V	N	V	I	G	A	D	S	L	T	D	A	M	N	M	M	A	D	Y	G	F	T	R	T	L	I	V	T	D	N	M	L	T	K	L	G	M	A	G	D	V	Q	K	A	L	E	E	R	N	I	F	S	V	I	Y	D	G	T	Q	P	N	P	T	T	E	N	V	A	A	G	L	K	L	L	K	E	N
Query Conservation
Alig confidence																									.	.														.						.	.	.	.	.	.
Template Conservation																									.	.														.						.	.	.	.	.	.
Template Sequence		N	N	Y	P	I	Y	V	E	H	G	A	I	K	Y	I	G	T	Y	L	N	Q	F	D	.	.	Q	S	F	L	L	I	D	E	Y	V	N	Q	Y	.	F	A	N	K	F	.	.	.	.	.	.	D	N	V	H	K	V	I	I	P	A	G	E	K	T	K	T	F	E	Q	Y	Q	E	T	L	E	Y	I	L	S	H
Template Known Secondary structure										T	T	G	G	G							T	T		S	.	.														.						.	.	.	.	.	.										S	G	G	G	G		S													T	T
Template Predicted Secondary structure																									.	.														.						.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50							.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		88	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure					.	.	.																																																		.
Query SS confidence					.	.	.																																																		.
Query Sequence		N	C	D	.	.	.	S	V	I	S	L	G	G	G	S	P	H	D	C	A	K	G	I	A	L	V	A	A	N	G	G	D	I	R	D	Y	E	G	V	D	R	S	A	K	P	Q	L	P	M	I	A	I	N	T	T	.	A	G	T	A	S	E	M	T	R	F	C	I	I	T	D	E	A	R	H	I	K	M	A	I
Query Conservation					.	.	.																																																		.
Alig confidence					.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	V	T	R	N	T	A	I	I	A	V	G	G	G	A	T	G	D	F	A	G	F	V	A	A	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	G	V	H	F	I	Q	V	P	T	T	I	L	A	H	D	S	S	V	G	G	K	V	G	I	N	S	K	Q	G	K	N	L	I	G	A
Template Known Secondary structure					T	T								S														G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G										S	T	T					T	S	S								S	S	S	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		V	D	K	H	V	T	P	L	L	S	V	N	D	S	S	L	M	I	G	M	P	K	S	L	T	A	A	T	G	M	D	A	L	T	H	A	I	.	.	.	E	A	Y	V	S	I	A	A	T	P	I	T	D	A	C	A	L	K	A	V	T	M	I	A	E	N	L	P	L	A	V	E	D	G	S	N	A	K	A	R
Query Conservation																																							.	.	.
Alig confidence					.	.	.																																.	.	.
Template Conservation					.	.	.
Template Sequence		F	Y	R	.	.	.	P	T	A	V	I	Y	D	L	D	F	L	K	T	L	P	F	K	Q	I	L	S	G	Y	A	E	V	Y	K	H	A	L	L	N	G	E	S	A	T	Q	D	I	E	Q	H	F	K	D	R	E	I	L	Q	S	L	N	G	M	D	K	Y	I	A	K	G	I	E	T	K	L	D	I	V	V	A
Template Known Secondary structure					.	.	.		S						G	G	G	G	G	G																																S		S							T	T	T
Template Predicted Secondary structure					.	.	.
Template SS confidence
		151	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	M	A	Y	A	Q	F	L	A	G	M	A	F	N	N	A	S	L	G	Y	V	H	A	M	A	H	Q	L	G	G	F	Y	N	L	P	H	G	V	C	N	A	V	L	L	P	H	V	Q	V	F	N	S	K	V	A	A	A	R	L	R	D	C	A	A	A	M	G	V	N	V	T	G	K	N	D	A	E	G	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	D	E	K	E	Q	G	V	R	K	F	L	N	L	G	H	T	F	G	H	A	V	E	Y	Y	H	K	I	P	H	G	H	A	V	M	V	G	I	I	Y	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	I	V	A	N	A	L	F	D	S	K	H	D	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	S	T	T	S	S	S	G	G	G	G	G	G	T	T	T																											.	.	.	.	.	.	.	.	.	.	.	.							T						.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template SS confidence
										228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.													.	270	.	.	.	.	.	.	.	.	.	280
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.							340	.	.	.	.							.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.						.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.						.	.	.	.	.	.
Query Sequence		E	A	C	I	N	A	I	R	E	L	A	K	K	V	D	I	P	A	G	.	.	.	.	.	.	L	R	D	L	N	.	.	.	.	.	.	V	K	E	E	D	F	A	V	L	A	T	N
Query Conservation																					.	.	.	.	.	.						.	.	.	.	.	.
Alig confidence		.	.	.																	.	.	.	.	.	.						.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	I	S	H	Y	I	Q	Y	L	I	Q	L	G	Y	P	L	D	G	V	Q	M	V	L	M	R	Q	F	G	D	I	V	V	Q	H	V	D	Q	L	T	L	Q	H	A	C	E	Q
Template Known Secondary structure		.	.	.												T						B								T	T							B
Template Predicted Secondary structure		.	.	.
Template SS confidence
					281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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