Job Description P37686 Confidence 100.00% Date Thu Jan 5 11:57:01 GMT 2012 Rank 12 Aligned Residues 331 % Identity 18% Template c1ta9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol dehydrogenase; PDBTitle: crystal structure of glycerol dehydrogenase from schizosaccharomyces2 pombe Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	A	S	T	F	F	I	P	S	V	N	V	I	G	A	D	S	L	T	D	A	M	N	M	M	A	D	Y	G	F	T	R	T	L	I	V	T	D	N	M	L	T	K	L	G	M	A	G	D	V	Q	K	A	L	E	E	R	N	I	F	S	V	I	Y	D	G	T	Q	P	N	P	T	T	E	N	V	A	A	G
Query Conservation
Alig confidence																																															.																					.
Template Conservation																																															.																					.
Template Sequence		S	K	D	R	I	F	T	S	P	Q	K	Y	V	Q	G	R	H	A	F	T	R	S	Y	M	Y	V	K	K	W	A	T	K	S	A	V	V	L	A	D	Q	N	V	W	N	I	.	C	A	N	K	I	V	D	S	L	S	Q	N	G	M	T	V	T	K	L	V	.	F	G	G	E	A	S	L	V	E	L	D	K	L
Template Known Secondary structure			S	S	B						S						T	T	G	G	G	G						T	T	T		S	S														.	T											T	T								.			S
Template Predicted Secondary structure																																															.																					.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	L	L	K	E	N	N	C	D	S	V	I	S	L	G	G	G	S	P	H	D	C	A	K	G	I	A	L	V	A	A	N	G	G	D	I	R	D	Y	E	G	V	D	R	S	A	K	P	Q	L	P	M	I	A	I	N	T	T	A	G	T	A	S	E	M	T	R	F	C	I	I	T	D	E	A	R	H	I	K
Query Conservation
Alig confidence				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	.	Q	C	P	D	D	T	Q	V	I	I	G	V	G	G	G	K	T	M	D	S	A	K	Y	I	A	H	S	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	P	S	I	I	C	P	T	T	A	S	S	D	A	A	T	S	S	L	S	V	I	Y	Q	F	Q	K	Y	S	F
Template Known Secondary structure			T	.	T	S		T	T									S														T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								S	S		S		S		T	T		S
Template Predicted Secondary structure				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210											.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	I	V	D	K	H	V	T	P	L	L	S	V	N	D	S	S	L	M	I	G	M	P	K	S	L	T	A	A	T	G	M	D	A	L	T	H	A	I	E	A	Y	V	S	I	A	A	T	P	.	.	.	.	.	.	.	.	.	.	I	T	D	A	C	A	L	K	A	V	T	M	I	A	E	N	L	P	L	A
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.
Template Sequence		Y	P	L	N	.	.	.	.	.	P	N	L	I	F	I	D	T	D	V	I	V	R	A	P	V	R	F	L	I	S	G	I	G	D	A	L	S	T	W	V	E	T	E	S	V	I	R	S	N	S	T	S	F	A	G	G	V	A	S	I	A	G	R	Y	I	A	R	A	C	K	D	T	L	E	K	Y	A	L	S	A
Template Known Secondary structure			S	S		.	.	.	.	.		S												S																									T	T				T	T	S	S	B
Template Predicted Secondary structure						.	.	.	.	.
Template SS confidence
		204	.	.	.						.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		231	.	.				.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.					270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure					.	.	.															.																							.	.	.	.
Query SS confidence					.	.	.															.																							.	.	.	.
Query Sequence		V	E	D	.	.	.	G	S	N	A	K	A	R	E	A	M	A	Y	A	Q	.	F	L	A	G	M	A	F	N	N	A	S	L	G	Y	V	H	A	M	A	H	Q	L	.	.	.	.	G	G	F	Y	N	L	P	H	G	V	C	N	A	V	L	L	P	H	V	Q	V	F	N	S	K	V	A	A	A	R	L	R	D
Query Conservation					.	.	.															.																							.	.	.	.
Alig confidence					.	.	.															.																							.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		I	L	S	N	T	R	G	V	C	T	E	A	F	E	N	V	V	E	A	N	T	L	M	S	G	L	G	F	E	N	G	G	L	A	A	A	H	A	I	H	N	G	M	T	A	I	H	G	P	V	H	R	L	M	H	G	E	K	V	A	Y	G	T	L	V	Q	V	V	L	E	D	W	.	.	.	.	.	.	.	.
Template Known Secondary structure								T																							S	S													G	G	G		G	G	G	G	G	S																	T	T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.				.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.																	.
Query SS confidence																																														.	.	.																	.
Query Sequence		C	A	A	A	M	G	V	N	V	T	G	K	N	D	A	E	G	A	E	A	C	I	N	A	I	R	E	L	A	K	K	V	D	I	P	A	G	L	R	D	L	N	V	K	.	.	.	E	E	D	F	A	V	L	A	T	N	A	L	K	D	A	C	.	G	F	T	N	P	I	Q	A	T	H	E	E	I	V	A	I
Query Conservation																																														.	.	.																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	E	D	F	N	N	L	A	S	F	M	A	K	C	H	L	P	I	T	L	E	E	L	G	I	P	N	V	T	D	E	E	L	L	M	V	G	R	A	T	L	R	P	D	E	S	I	H	N	M	S	K	K	F	N	P	S	Q	I	A	D	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T				S					T		T	T														T		T	T	S	G	G	G	G	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		379	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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