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Job DescriptionP31678
Confidence98.63%DateThu Jan 5 11:48:34 GMT 2012
Rank83Aligned Residues193
% Identity18%Templatec3qnmA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:haloacid dehalogenase-like hydrolase; PDBTitle: haloalkane dehalogenase family member from bacteroides2 thetaiotaomicron of unknown function
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60 .........70...
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Query Sequence  AWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATASDGALALIS. . . . . . . . . . . . . . . . . . . . . . GRSMVELDALAKP
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Template Sequence  NLFFDLDDTIWA. . . . . . . . . FSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFF
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BTTTB
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Query Sequence  YRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTVIAQYPGA. . . . . . ELEAKGMAFALHYRQAPQHEDALMTLA
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Template Sequence  YPLQAVGVE. . . . . . . . . . . . . . . . DEALAERFSEDFFAIIPTKSGLXPHAKEVLEYLAPQYNLYILSNGFRELQSRKXR
Template Known Secondary structure  TT

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GGG


BSTTTTTS
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Query Sequence  QRITQIWPQMALQQGKCVVEIKPRGTSKGEAIAAFMQEAPFIGRTPVFLGDDL. TDESGFAVVNRLGGMSVKIGTGA. . .
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Template Sequence  SAGVDRYFKKIILSEDL. . . . . GVLKPRPEIFHFALSATQSELRESLXIGDSWEADITGAHGVG. . . XHQAFYNVTERTV
Template Known Secondary structure  T
GGG
SGGGT.....T

TTSTT

GGGS
TTTTTT...


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   140.........150...... ...160.........170.........180.........190........ .200.........210.
 
   224.....230.........240.
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Query Sequence  . . TQASWRLAGVPDVWSWLE
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Template Sequence  FPFQPTYHIHSLKELXNLLE
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   212.......220.........230.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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