Job Description P31678 Confidence 99.95% Date Thu Jan 5 11:48:34 GMT 2012 Rank 22 Aligned Residues 191 % Identity 16% Template c3mpoD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:predicted hydrolase of the had superfamily; PDBTitle: the crystal structure of a hydrolase from lactobacillus brevis Resolution 2.90 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.						.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																																																												.	.	.	.	.															.
Query SS confidence																																																												.	.	.	.	.															.
Query Sequence		A	W	F	F	D	L	D	G	T	L	A	E	I	K	P	H	P	D	Q	V	V	V	P	D	N	I	L	Q	G	L	Q	L	L	A	T	A	S	D	G	A	L	A	L	I	S	G	R	S	M	V	E	L	D	A	L	A	K	P	.	.	.	.	.	Y	R	F	P	L	A	G	V	H	G	A	E	R	R	.	D	I
Query Conservation																																																												.	.	.	.	.															.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.													.																						.	.	.	.	.															.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		L	I	A	I	D	I	D	G	T	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	I	D	A	V	Q	A	A	K	A	Q	.	G	I	K	V	V	L	C	T	G	R	P	L	T	G	V	Q	P	Y	L	D	A	X	D	I	D	G	D	D	Q	Y	A	I	T	F	N	G	S	V	A	Q	T	I	S
Template Known Secondary structure							T	T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	T	T										T	.	T								S	S		G	G	G	T							T	T			S	S	S						G	G	G	T					T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.														.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.						.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																										.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	K	T	H	I	V	H	L	P	D	A	I	A	R	D	I	S	V	Q	L	H	T	V	.	.	.	.	.	I	A	Q	Y	P	G	A	E	L	E	A	K	G	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	L	H	Y	R	Q	A	P	Q	H
Query Conservation																										.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	V	L	T	N	H	S	L	T	Y	E	D	Y	I	D	L	E	A	W	A	R	K	V	R	A	H	F	Q	I	E	T	P	D	Y	I	Y	T	A	N	K	D	I	S	A	Y	T	I	A	E	S	Y	L	V	R	X	L	I	Q	Y	R	E	V	S	E	T	P	R	D	L	T	I	S	K	A	X	F	V	D	Y
Template Known Secondary structure		S																								T								S	S							S	S													T								G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		E	D	A	L	M	T	L	A	Q	R	I	T	Q	I	W	P	.	.	Q	M	A	L	Q	Q	G	K	C	V	V	E	I	K	P	R	G	T	S	K	G	E	A	I	A	A	F	M	Q	E	A	P	F	I	G	R	T	P	V	F	L	G	D	D	L	T	D	E	S	G	F	A	V	V	N	R	L	G	G	M	S	V
Query Conservation																		.	.
Alig confidence																		.	.																																											.	.	.										.	.	.	.
Template Conservation																																																														.	.	.										.	.	.	.
Template Sequence		P	Q	V	I	E	Q	V	K	A	N	X	P	Q	D	F	K	D	R	F	S	V	V	Q	S	A	P	Y	F	I	E	V	X	N	R	R	A	S	K	G	G	T	L	S	E	L	V	D	Q	L	G	L	T	A	D	D	V	X	T	L	G	.	.	.	N	D	L	T	X	I	K	Y	A	.	.	.	.	G	L	G	V
Template Known Secondary structure																											T	T							T	T														T	T			G	G	G						.	.	.	T	T							S	.	.	.	.	T
Template Predicted Secondary structure																																																														.	.	.										.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.					.	.	230	.
		218	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	G	T	G	A	T	Q	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	X	G	N	A	I	D	E	V	K
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions