Job Description P31678 Confidence 97.78% Date Thu Jan 5 11:48:34 GMT 2012 Rank 122 Aligned Residues 150 % Identity 12% Template c3b8cB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atpase 2, plasma membrane-type; PDBTitle: crystal structure of a plasma membrane proton pump Resolution 3.60 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	P	D	N	I	L	Q	G	L	Q	L	L	A	T	A	S	D	G	A	L	A	L	I	S	G	R	S	M	V	E	L	D	A	L	A	K	P	Y	R	F	P	L	A	G	V	H	G	A	E	R	R	D	I	N	G	K	T	H	I	V	H	L	P	D	A	I	A	R	D	I	S	V	Q	L	H	T	V	I	A
Query Conservation
Alig confidence															.																																												.	.	.														.	.	.	.	.	.	.
Template Conservation															.																																												.	.	.														.	.	.	.	.	.	.
Template Sequence		P	P	R	H	D	S	A	E	T	I	R	R	A	.	L	N	L	G	V	N	V	K	M	I	T	G	D	Q	L	A	I	G	K	E	T	G	R	R	L	G	M	G	T	N	M	Y	P	S	S	A	L	L	G	T	H	K	D	.	.	.	A	N	L	A	S	I	P	V	E	E	L	I	E	.	.	.	.	.	.	.
Template Known Secondary structure															.			T	T								S	S						T					T	T	T		T	T			S	S	S	S	S			B	G	G	G	G	.	.	.	T	T	S			S								.	.	.	.	.	.	.
Template Predicted Secondary structure															.																																												.	.	.														.	.	.	.	.	.	.
Template SS confidence
		488	.	490	.	.	.	.	.	.	.	.	.	500		.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.				.	.	.	.	.	.	550	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	P	G	A	E	L	E	A	K	G	M	A	F	A	L	H	Y	R	Q	A	P	Q	H	E	D	A	L	M	T	L	A	Q	R	I	T	Q	I	W	P	Q	M	A	L	Q	Q	G	K	C	V	V	E	I	K	P	R	G	T	S	K	G	E	A	I	A	A	F	M	Q	E	A	P	F	I	G	R	T	P	V	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.													.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.													.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	D	G	F	A	G	V	F	P	E	.	.	H	K	Y	E	I	V	K	K	L	Q	E	R	.	.	.	.	K	H	I	V	G	M
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S										.	.												T	.	.	.	.	T					B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.													.	.	.	.
Template SS confidence
																																															557	.	.	560	.	.	.	.	.	.	.			.	.	570	.	.	.	.	.	.	.	.	.					580	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	D	D	L	T	D	E	S	G	F	A	V	V	N	R	L	G	G	M	S	V	K	I	G	T	G	A	T	Q	A	S	W	R	L	A	G	V	P	D	V	W	S	W	L	E	M	I	T	T	A	L	Q	Q	K	R	E
Query Conservation
Alig confidence																																									.	.	.	.	.
Template Conservation																																									.	.	.	.	.
Template Sequence		T	G	D	G	V	N	D	A	P	A	L	K	K	A	D	I	G	I	A	V	A	D	A	T	D	A	A	R	G	A	S	D	I	V	L	T	E	P	G	.	.	.	.	.	L	S	V	I	I	S	A	V	L	T	S	R	A
Template Known Secondary structure					S	S	T	T							S	S	S					S	S	S					G	G	G		S	S		B	S	S		S	.	.	.	.	.					T					T
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.						.	.	.	.	.	630	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions