Job Description P31678 Confidence 98.85% Date Thu Jan 5 11:48:34 GMT 2012 Rank 72 Aligned Residues 150 % Identity 25% Template c2odaB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:hypothetical protein pspto_2114; PDBTitle: crystal structure of pspto_2114 Resolution 1.90 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.									.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.
Query Sequence		L	S	A	K	Y	A	W	F	F	D	L	D	G	T	L	A	E	.	.	.	.	.	.	.	.	I	K	P	H	P	D	Q	V	V	V	P	D	N	I	L	Q	G	L	Q	L	L	A	T	A	S	D	G	A	L	A	L	I	S	G	R	S	M	V	E	L	D	A	L	A	K	P	Y	R	F	P	L	A	G	V	H
Query Conservation																			.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.																									.																														.
Template Conservation																																																			.																														.
Template Sequence		L	P	T	F	P	A	L	L	F	G	L	S	G	C	L	V	D	F	G	A	Q	A	A	T	S	D	T	P	D	D	E	H	A	Q	L	T	P	G	A	Q	N	A	L	K	A	L	R	D	Q	.	G	X	P	C	A	W	I	D	E	L	P	E	A	L	S	T	P	L	A	A	P	V	N	D	W	X	I	A	A	.
Template Known Secondary structure						S						T	B	T	T	T	B		T	T		G	G	G	G		S	S			G	G	G	G	S	B		T	T												.	T									S									T	T	T	T	T	T	T					.
Template Predicted Secondary structure																																																			.																														.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	E	R	R	D	I	N	G	K	T	H	I	V	H	L	P	D	A	I	A	R	D	I	S	V	Q	L	H	T	V	I	A	Q	Y	P	G	A	E	L	E	A	K	G	M	A	F	A	L	H	Y	R	Q	A	P	Q	H	E	D	A	L	M	T	L	A	Q	R	I	T	Q	I	W	P	Q	M	A	L	Q	Q	G
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																														.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	C	V	V	E	I	K	P	R	G	T	S	K	G	E	A	I	A	A	F	M	Q	E	A	P	F	I	G	.	R	T	P	V	F	L	G	D	D	L	T	D	E	S	G	F	A	V	V	N	R	L	G	G	M	S	V	K	I	G	T	G	A	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																									.																					.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																														.	.	.
Template Sequence		.	.	.	.	P	R	P	T	A	G	W	P	Q	P	D	A	C	W	X	A	L	X	A	L	N	V	S	Q	L	E	G	C	V	L	I	S	G	D	P	R	L	L	Q	S	G	L	N	A	G	.	.	.	L	W	T	I	G	L	A	S	C	G	P	L	C	G	L	S	P	S	Q	W	Q	A	L	N	N	A	E	R
Template Known Secondary structure		.	.	.	.				S	S		T	T	S	T										T	T		S		S	T	T						S											T	T	.	.	.							S	S	S	S	T	T	T										S
Template Predicted Secondary structure		.	.	.	.																																														.	.	.
Template SS confidence
						81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
																	226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	W	R	L	A	G	V	P	D	V	W	S	W	L	E	M	I	T	T	A	L	Q	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Q	R	R	A	Q	A	T	L	K	L	Y	S	L	G	V	H	S	V	I	D	H	L	G	E	L	E	S	C	L	A	D	I	A	L	R	R	S	K
Template Known Secondary structure																T		S				S	S	G	G	G														T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions