 |
| Job Description | P31678 | | Confidence | 96.86% | Date | Thu Jan 5 11:48:34 GMT 2012 |
| Rank | 133 | Aligned Residues | 68 |
| % Identity | 12% | Template | c2no5B_ |
| PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:(s)-2-haloacid dehalogenase iva; |
PDBTitle: crystal structure analysis of a dehalogenase with intermediate complex
|
| Resolution | 2.60 Å |
|
| | |
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
| Predicted Secondary structure | |
|
|
|
|
|  | | | | | | | | | | | |
|
|
| | | |  | | |  |
|
|
|
|
| | | | | | | |
|
|
|
|
| | | | | | |
|
|
|
| . | . | . | . | . | . | . |
|
|
|
| | | |
|
| | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
P | R | G | T | S | K | G | E | A | I | A | A | F | M | Q | E | A | P | F | I | G | R | T | P | V | F | L | G | D | D | L | T | D | E | S | G | F | A | V | V | N | R | L | G | G | M | S | V | K | I | G | T | G | A | . |
. |
. |
. |
. |
. |
. |
T | Q | A | S | W | R | L | A | G | V | P | D | V | W | S | W | L |
| Query Conservation | |
| |
| | |
|
| |
|
| | |
| | | | |
|
| | | | |
|
| |
|
|
| | |
|
| | |
| | | |
| | | | | | | |
|
|
|
| | | | . | . | . | . | . | . | . | | |
| | | | | | | | | |
| | | |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | |
| | | | | | | | | | | | | | | | |
| | | | | |
|
|
| | | |
|
| | |
| | |
|
| . | . | . | | | |
| |
| | | | | | | | | | | | | | |
| | |
| |
|
| |
|
| | |
|
|
| Template Sequence | |
K | I | Y | K | P | D | P | R | I | Y | Q | F | A | C | D | R | L | G | V | N | P | N | E | V | C | F | V | S | S | N | A | W | D | L | G | G | A | G | K | F | G | . |
. |
. |
F | N | T | V | R | I | N | R | Q | G | N | P | P | E | Y | E | F | A | P | L | K | H | Q | V | N | S | L | S | E | L | W | P | L | L |
| Template Known Secondary structure | |
T |
|
| T | T | S | | | | | | | | | | | | T |
|
| G | G | G | | | | | | S |
| | | | | | | | | | | T | . | . | . |
| | | | | |
| S | S |
|
|
|
|
|
| T | T | S |
|
| S | | | | S | S | G | G | G | | | | | |
| Template Predicted Secondary structure | |
|
|
|
|
|
|
|
| | | | | | | | | |
|
|
|
|
|
|
|
|
|
|
|
|
| | | | | | | | | |
|
| . | . | . |
| | | | | |
|
|
|
|
|
|
|
| | | |
|
|
|
| | | |
|
| | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | |
|
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
