Job Description P31678 Confidence 97.87% Date Thu Jan 5 11:48:34 GMT 2012 Rank 119 Aligned Residues 149 % Identity 12% Template c1mhsA_ PDB info PDB header:membrane protein, proton transport Chain: A: PDB Molecule:plasma membrane atpase; PDBTitle: model of neurospora crassa proton atpase Resolution 8.00 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	P	D	N	I	L	Q	G	L	Q	L	L	A	T	A	S	D	G	A	L	A	L	I	S	G	R	S	M	V	E	L	D	A	L	A	K	P	Y	R	F	P	L	A	G	V	H	G	A	E	R	R	D	I	N	G	K	T	H	I	V	H	L	P	D	A	I	A	R	D	I	S	V	Q	L	H	T	V	I	A
Query Conservation
Alig confidence																		.																																																								.	.	.	.	.	.	.	.
Template Conservation																		.																																																								.	.	.	.	.	.	.	.
Template Sequence		P	P	R	H	D	T	Y	K	T	V	C	E	A	K	T	L	.	G	L	S	I	K	M	L	T	G	D	A	V	G	I	A	R	E	T	S	R	Q	L	G	L	G	T	N	I	Y	N	A	E	R	L	G	L	G	G	G	G	D	M	P	G	S	E	V	Y	D	F	V	E	A	A	D	.	.	.	.	.	.	.	.
Template Known Secondary structure																		.	T								S	S													T	S	S		S				S	S	S	S	S	S		B				G	G	G	G	G	G	G	T	T	T	T	T	T	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.																																																								.	.	.	.	.	.	.	.
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550		.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	P	G	A	E	L	E	A	K	G	M	A	F	A	L	H	Y	R	Q	A	P	Q	H	E	D	A	L	M	T	L	A	Q	R	I	T	Q	I	W	P	Q	M	A	L	Q	Q	G	K	C	V	V	E	I	K	P	R	G	T	S	K	G	E	A	I	A	A	F	M	Q	E	A	P	F	I	G	R	T	P	V	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.												.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.												.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	A	E	V	F	P	Q	.	.	H	K	Y	N	V	V	E	I	L	Q	Q	.	.	.	.	R	G	Y	L	V	A	M
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S			S	T	.	.											T	.	.	.	.	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.												.	.	.	.
Template SS confidence
																																																		606	.	.	.	610	.	.	.			.	.	.	.	.	.	620	.	.	.	.					.	.	.	.	.	630	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.					.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		L	G	D	D	L	T	D	E	S	G	F	A	V	V	N	R	L	G	G	M	S	V	K	I	G	T	.	.	.	.	G	A	T	Q	A	S	W	R	L	A	G	V	P	D	V	W	S	W	L	E	M	I	T	T	A	L	Q	Q	K	R	E	N	N	R	S
Query Conservation																												.	.	.	.
Alig confidence																	.	.	.	.								.	.	.	.														.	.	.	.	.
Template Conservation																	.	.	.	.																									.	.	.	.	.
Template Sequence		T	G	D	G	V	N	D	A	P	S	L	K	K	A	D	.	.	.	.	T	G	I	A	V	E	G	S	S	D	A	A	R	S	A	A	D	I	V	F	L	A	P	G	.	.	.	.	.	L	G	A	I	I	D	A	L	K	T	S	R	Q	I	F	H	R
Template Known Secondary structure						G	G	G							S	S	.	.	.	.						T	T	S							S	S	S				S	S			.	.	.	.	.	S
Template Predicted Secondary structure																	.	.	.	.																									.	.	.	.	.
Template SS confidence
		632	.	.	.	.	.	.	.	640	.	.	.	.	.	.					.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670						.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions