Job Description P75908 Confidence 99.96% Date Thu Jan 5 12:15:54 GMT 2012 Rank 11 Aligned Residues 153 % Identity 31% Template c3qyyB_ PDB info PDB header:signaling protein/inhibitor Chain: B: PDB Molecule:response regulator; PDBTitle: a novel interaction mode between a microbial ggdef domain and the bis-2 (3, 5 )-cyclic di-gmp Resolution 1.90 Å

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		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		V	T	K	N	I	A	H	R	D	P	L	T	N	I	F	N	R	N	Y	F	F	N	E	L	T	V	Q	S	A	.	.	S	A	Q	K	T	P	Y	C	V	M	I	M	D	I	D	H	F	K	K	V	N	D	T	W	G	H	P	V	G	D	Q	V	I	K	T	V	V	N	I	I	G	K	S	I	R	P	D	D	L
Query Conservation																															.	.
Alig confidence																															.	.
Template Conservation
Template Sequence		D	L	K	R	H	A	L	F	D	P	L	T	E	A	L	N	R	R	G	C	E	Q	A	M	R	D	S	V	T	A	A	Q	R	E	G	W	P	F	V	L	F	V	L	D	M	D	N	L	K	P	I	N	D	R	F	G	H	L	A	G	D	R	V	L	V	R	L	V	E	S	A	Y	G	W	L	G	A	Q	D	W
Template Known Secondary structure									B		T	T	T		S	B																			T												S	S																										T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	R	V	G	G	E	E	F	G	V	L	L	T	D	I	D	T	E	R	A	K	A	L	A	E	R	I	R	E	N	V	E	R	L	T	G	D	N	P	E	Y	A	I	P	Q	K	V	T	I	S	I	G	A	V	V	T	Q	E	N	A	L	N	P	N	E	I	Y	R	L	A	D	N	A	L	Y	E	A	K	E
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		I	G	R	W	G	G	D	E	F	L	I	G	V	H	A	S	E	D	E	A	T	L	K	L	N	Q	W	L	S	M	L	E	E	A	P	.	.	.	.	.	.	.	.	.	.	.	.	L	H	V	S	A	G	S	A	V	C	.	E	V	G	I	D	A	T	E	L	Y	R	R	A	D	A	A	M	Y	R	A	K	F
Template Known Secondary structure							T	T								S																					.	.	.	.	.	.	.	.	.	.	.	.											.		T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.													.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		435	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	R	N	K	V	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	G	R	R	L	V	R
Template Known Secondary structure		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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