Job Description P75908 Confidence 23.35% Date Thu Jan 5 12:15:54 GMT 2012 Rank 83 Aligned Residues 53 % Identity 17% Template c3iyuY_ PDB info PDB header:virus Chain: Y: PDB Molecule:outer capsid protein vp4; PDBTitle: atomic model of an infectious rotavirus particle Resolution 3.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330			.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		L	T	V	Q	S	A	S	A	Q	K	T	P	Y	C	V	M	I	M	D	I	D	H	F	K	K	V	N	D	T	W	G	.	.	H	P	V	G	D	Q	V	I	K	T	V	V	N	I	I	G	K	S	I	R	P	D
Query Conservation																																	.	.
Alig confidence																																	.	.
Template Conservation
Template Sequence		V	Q	K	F	A	D	L	V	T	D	S	P	V	I	S	A	I	I	D	F	K	T	L	K	N	L	N	D	N	Y	G	I	S	R	Q	Q	A	F	N	L	L	R	S	D	P	R	V	L	R	E	F	I	N	Q	D
Template Known Secondary structure											T	S			B			S	S											T	T													T											S	S
Template Predicted Secondary structure
Template SS confidence
		705	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions