 |
Job Description | P75908 | Confidence | 85.87% | Date | Thu Jan 5 12:15:54 GMT 2012 |
Rank | 31 | Aligned Residues | 78 |
% Identity | 27% | Template | c3gqcB_ |
PDB info |
PDB header:transferase/dna | Chain: B: PDB Molecule:dna repair protein rev1; |
PDBTitle: structure of human rev1-dna-dntp ternary complex
|
Resolution | 2.50 Å |
|
 |
  |   |
336 | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | |
|
|
. | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | V | I | K | T | V | V | N | I | I | G | K | S | I | R | P | D | D | L | L | A | R | V | G | G | E | E | F | G | V | L | L | T | D | I | D | T | E | . |
. |
. |
R | A | K | A | L | A | E | R | I | R | E | N | V | E | R | L | T | G | D | N | P | E | Y | A | I | P | Q | K | V | T | I | S | I | G | A | V | V | T | Q |
Query Conservation |   |
  |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |   | . | . | . |   |
|   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   | . | . | . |
|
|   |   |
|
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|
| . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|
|
|
|   |
|   |
Template Sequence |   |
E | V | A | Q | T | L | Y | E | T | L | A | S | Y | T | H | N | . |
. |
. |
I | E | A | V | S | C | D | E | A | L | V | D | I | T | E | I | L | A | E | T | K | L | T | P | D | E | F | A | N | A | V | R | M | E | I | K | D | Q | T | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
C | A | A | S | V | G | I | G | S | N | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
| . | . | . |  |  |  |  |  | T | T |  |  |  |  |  |
|  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  | S | S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
548 | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | |
|
|
. | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 610 | . | . | . | . |
  |
  |   |
413 | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | N | A | L | N | P | N | E | I | Y | R | L | A | D | N | A | L | Y | E | A | K | E | T | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|
|   |
|
|   |   |
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . |   |
|
|
|
|
|
|   |   |
|
|
|   |
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | L | A | R | M | A | T | R | K | A | K | P | D | G |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
| S | S |
|
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
615 | . | . | . | . | 620 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|