Job Description P75908 Confidence 100.00% Date Thu Jan 5 12:15:54 GMT 2012 Rank 2 Aligned Residues 175 % Identity 31% Template c3ezuA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of multidomain protein of unknown function with2 ggdef-domain (np_951600.1) from geobacter sulfurreducens at 1.95 a3 resolution Resolution 1.95 Å

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		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		V	V	S	K	L	T	V	M	V	I	F	M	C	H	I	F	S	A	L	R	V	T	K	N	I	A	H	R	D	P	L	T	N	I	F	N	R	N	Y	F	F	N	E	L	T	V	Q	S	A	.	.	S	A	Q	K	T	P	Y	C	V	M	I	M	D	I	D	H	F	K	K	V	N	D	T	W	G	H	P	V	G
Query Conservation																																																			.	.
Alig confidence																																																			.	.																								.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.
Template Sequence		A	T	A	E	T	E	L	L	G	E	A	L	F	R	L	W	N	E	A	R	Q	L	A	A	Q	S	H	F	D	A	L	T	G	V	X	T	R	A	G	F	F	K	T	V	G	S	L	A	Y	A	A	Q	R	S	G	S	N	V	G	I	X	L	I	D	L	D	Y	F	K	L	V	G	Q	T	.	.	.	.	.	G
Template Known Secondary structure																													B		T	T	T		S	B																				T																				.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.						230
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.				410	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		D	Q	V	I	K	T	V	V	N	I	I	G	K	S	I	R	P	D	D	L	L	A	R	V	G	G	E	E	F	G	V	L	L	T	D	I	D	T	E	R	A	K	A	L	A	E	R	I	R	E	N	V	E	R	L	T	G	D	N	P	E	Y	A	I	P	Q	K	V	T	I	S	I	G	A	V	.	.	.	V	T
Query Conservation																																																																													.	.	.
Alig confidence																																																									.	.	.	.	.	.															.	.	.
Template Conservation																																																									.	.	.	.	.	.
Template Sequence		D	R	I	L	Q	L	V	A	E	T	I	T	S	H	L	R	R	S	D	V	V	G	R	Y	D	G	D	E	F	V	V	Y	L	S	P	V	E	P	A	S	L	R	T	V	A	E	N	L	R	R	S	I	E	E	E	.	.	.	.	.	.	S	A	R	X	V	P	V	T	A	S	I	G	V	A	Q	G	I	L	G
Template Known Secondary structure															T			T	T							S	S	S							S	S																					.	.	.	.	.	.	T	T	T	T
Template Predicted Secondary structure																																																									.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290							.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	N	A	L	N	P	N	E	I	Y	R	L	A	D	N	A	L	Y	E	A	K	E	T	G	R	N	K	V	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	V	D	G	G	I	E	E	L	V	R	L	A	D	E	C	L	X	Q	A	K	Y	T	G	K	N	K	V	V	V
Template Known Secondary structure		S																							S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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