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Job Description | P75908 | Confidence | 22.39% | Date | Thu Jan 5 12:15:54 GMT 2012 |
Rank | 84 | Aligned Residues | 73 |
% Identity | 16% | Template | c3b6nA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate |
PDBTitle: crystal structure of 2c-methyl-d-erythritol 2,4-2 cyclodiphosphate synthase pv003920 from plasmodium vivax
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Resolution | 2.26 Å |
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330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query Sequence |   |
G | H | P | V | G | D | Q | V | I | K | T | V | V | N | I | I | G | K | S | I | R | P | D | D | L | L | A | R | V | G | G | E | E | F | G | V | L | L | T | D | I | D | T | E | R | A | K | A | L | A | E | R | I | R | E | N | V | E | R | L | T | G | D | N | P | E | Y | A | I | P | Q | K | V | T | I | S | I | G | A | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | H | S | D | G | D | V | I | F | H | A | L | V | D | A | L | L | G | G | M | S | C | S | K | . |
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N | S | L | S | F | L | R | Y | A | R | L | L | L | Y | K | R | . |
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N | Y | A | I | A | N | V | D | I | I | V | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
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. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
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410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | T | Q | E | N | A | L | N | P | N | E | I | Y | R | L | A | D | N | A | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | V | P | K | I | S | P | I | R | E | E | I | V | R | N | I | S | S | A | L |
Template Known Secondary structure |   |
S | S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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