Job Description P75908 Confidence 42.42% Date Thu Jan 5 12:15:54 GMT 2012 Rank 61 Aligned Residues 84 % Identity 14% Template c2pmpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase; PDBTitle: structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from2 the isoprenoid biosynthetic pathway of arabidopsis thaliana Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.					.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		G	H	P	V	G	D	Q	V	I	K	T	V	V	N	I	I	G	K	S	I	R	P	D	D	L	L	A	R	V	G	G	E	E	F	G	V	L	L	T	D	I	D	T	E	.	.	.	.	R	A	K	A	L	A	E	R	I	R	E	N	V	E	R	L	T	G	D	N	P	E	Y	A	I	P	Q	K	V	T	I	S
Query Conservation																																														.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.												.	.	.	.																	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Sequence		A	H	S	D	G	D	V	L	L	H	C	V	V	D	A	I	L	G	A	L	G	L	P	D	.	.	.	.	.	.	.	.	.	I	G	Q	I	F	P	D	S	D	P	K	W	K	G	A	A	S	S	V	F	I	K	E	A	V	R	L	M	D	E	A	.	.	.	.	.	.	G	Y	E	I	G	N	L	D	A	T
Template Known Secondary structure		S	S	S																		T				.	.	.	.	.	.	.	.	.					S		S	S		S	S		S	S																		.	.	.	.	.	.	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.										60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90							.	.	.	.	.	.	.	.	.	100
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	A	V	V	T	Q	E	N	A	L	N	P	N	E	I	Y	R	L	A	D	N	A	L
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		L	.	I	L	Q	R	P	K	I	S	P	H	K	E	T	I	R	S	N	L	S	K	L	L
Template Known Secondary structure			.			S	S	S			G	G	G
Template Predicted Secondary structure			.
Template SS confidence
		101		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions