Job Description P12998 Confidence 99.94% Date Wed Jan 25 15:20:38 GMT 2012 Rank 214 Aligned Residues 344 % Identity 10% Template d3bc8a1 SCOP info PLP-dependent transferase-like PLP-dependent transferases SepSecS-like Resolution 1.65

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.		110	.	.
Predicted Secondary structure																																																																	.	.	.											.
Query SS confidence																																																																	.	.	.											.
Query Sequence		D	D	R	Q	Y	L	N	F	S	S	N	D	Y	L	G	L	S	H	H	P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	.	.	.	S	R	A	L	L	F	I	S	G	F	.	A	A	N
Query Conservation																																																																	.	.	.											.
Alig confidence																																																																	.	.	.											.
Template Conservation
Template Sequence		D	S	N	N	F	L	G	N	C	G	V	G	E	R	E	G	R	V	A	S	A	L	V	A	R	R	H	Y	R	F	I	H	G	I	G	R	Q	P	K	A	A	G	S	S	L	L	N	K	I	T	N	S	L	V	L	N	V	I	K	L	A	G	V	H	S	V	A	S	C	F	V	V	P	M	A	T	G	M	S	L
Template Known Secondary structure		B	G	G	G		T	T					S	S						S								T	T	T			S		B					S	B																						T		T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		113	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.									.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure										.	.	.																																.	.	.	.	.	.	.	.																.
Query SS confidence										.	.	.																																.	.	.	.	.	.	.	.																.
Query Sequence		Q	A	V	I	A	A	M	M	.	.	.	A	K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	A	A	S	L	S	P	S	Q	L	R	R	F	A	.	.	.	.	.	.	.	.	H	N	D	V	T	H	L	A	R	L	L	A	S	P	C	.	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M
Query Conservation										.	.	.																																.	.	.	.	.	.	.	.																.
Alig confidence										.	.	.																																.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		T	L	C	F	L	T	L	R	H	K	R	P	K	A	K	Y	I	I	W	P	R	I	D	Q	K	S	C	F	K	S	M	V	T	A	G	F	E	P	V	V	I	E	N	V	L	E	G	D	E	L	R	T	D	L	K	A	V	E	A	K	I	Q	E	L	G	P	E	H	I	L	C	L	H	S	T	T	A	C	F	A
Template Known Secondary structure													T	T																					T	T												T	T																		G	G	G								S	S			T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	D	S	A	P	L	A	E	I	Q	Q	V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S	G	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	R
Query Conservation
Alig confidence																																																																																	.
Template Conservation																																																																																	.
Template Sequence		P	R	V	P	D	R	L	E	E	L	A	V	I	C	A	N	Y	D	I	P	H	V	V	N	N	A	Y	G	L	Q	S	S	K	C	M	H	L	I	Q	Q	G	A	R	V	G	R	I	D	A	F	V	Q	S	L	D	N	F	M	V	P	V	G	G	A	I	I	A	G	F	N	E	P	F	I	Q	D	I	S	K	.
Template Known Secondary structure		T	B																T								T	T	T	T	T															S													S			S	S							S											.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.					310	.	.	.	.	.	.	.	.	.	320	.	.	.	.								.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.																.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.																.	.	.	.	.	.	.
Query Sequence		H	L	I	Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	.	.	.	.	P	F	T	L	A	D	S	C	S	A	I	Q	P	L	I	.	.	.	.	.	.	.	V	G	D	N	S
Query Conservation																																																			.	.	.	.																.	.	.	.	.	.	.
Alig confidence		.	.																																																.	.	.	.																.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	M	Y	P	G	R	A	S	A	S	P	S	L	D	V	L	I	T	L	L	S	L	G	C	S	G	Y	R	K	L	L	K	E	R	K	E	M	F	V	Y	L	S	T	Q	L	K	K	L	A	E	A	H	N	E	R	L	L	Q	T	P	H	N	P	I	S	L	A	M	T	L	K	T	I	D	G	H	H	D	K
Template Known Secondary structure		.	.		S		S		B		S																																											T	T			B				T	T		S	S							T	T	T	S	S	S	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.																		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W	V	T	A	I	R	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	P	A	G	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G	N
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	T	Q	L	G	S	M	L	F	T	R	Q	V	S	G	A	R	A	V	P	L	G	N	V	Q	T	V	S	G	H	T	F	R	G	F	M	S	H	A	D	N	Y	P	C	A	Y	L	N	A	A	A	A	I	G	M	K	M	Q	D	V	D	L	F	I	K	R	L	D	K	C
Template Known Secondary structure													T	T			S						S							T	T					T	T	T	T	T	S	S			S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions