Job Description P12998 Confidence 100.00% Date Wed Jan 25 15:20:38 GMT 2012 Rank 32 Aligned Residues 355 % Identity 17% Template d2gsaa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

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		8	.	10	.	.	.	.	.	.	.	.	.															20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																.	.	.
Query Sequence		N	A	A	L	D	A	R	R	A	A	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	R	R	Y	P	V	A	Q	G	A	G	R	W	L	.	V	A	D	D	R	Q	Y	L	N	F	S	S	N	D	Y	.	.	.	L	G	L	S	H	H	P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																.	.	.			.
Template Conservation																																																																.
Template Sequence		S	D	E	I	F	A	A	A	Q	K	L	M	P	G	G	V	S	S	P	V	R	A	F	K	S	V	G	G	Q	P	I	V	F	D	R	V	K	D	A	Y	A	W	D	V	D	G	N	R	Y	I	D	Y	V	G	T	W	G	P	A	I	C	G	.	H	A	H	P	E	V	I	E	A	L	K	V	A	M	E	K	G
Template Known Secondary structure													S	G	G	G	S	S	S	G	G	G			T	T	T	S	S										B	T					T	T	S						S	S	G	G	G	T	T	T	T	T		.	B	T													T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																														.																							.	.	.
Query SS confidence																														.																							.	.	.
Query Sequence		G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	.	G	Y	S	R	A	L	L	F	I	S	G	F	A	A	N	Q	A	V	I	A	A	M	.	.	.	M	A	K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	A	A	S	L	S	P	S
Query Conservation																														.																							.	.	.
Alig confidence							.	.	.	.	.	.	.																	.																							.	.	.
Template Conservation							.	.	.	.	.	.	.
Template Sequence		T	S	F	G	A	.	.	.	.	.	.	.	P	C	A	L	E	N	V	L	A	E	M	V	N	D	A	V	P	S	I	E	M	V	R	F	V	N	S	G	T	E	A	C	M	A	V	L	R	L	M	R	A	Y	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	M	F	L	V	K	A	G	S
Template Known Secondary structure		S			S	S	.	.	.	.	.	.	.																S	T	T		S						S	S																									T	T					S		G	G	G		S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.								.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
																					146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	R	R	F	A	H	N	D	V	T	H	L	A	R	L	L	A	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	P	.	.	.	.	L	A	E	I	Q	Q	V	T	Q	Q	H	N	G	W	L	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Template Conservation
Template Sequence		G	V	A	T	L	G	L	P	S	S	P	G	V	P	K	K	T	T	A	N	T	L	T	T	P	Y	N	D	L	E	A	V	K	A	L	F	A	E	N	P	G	E	I	A	G	V	I	L	E	P	I	V	G	N	S	G	F	I	V	P	D	A	G	F	L	E	G	L	R	E	I	T	L	E	H	D	A	L	L	V
Template Known Secondary structure						T	T			S		S	S	S						T	T						T	T										T	T	S	T	T	T								S	S	B		S	S	S		B				T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S	G	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	R	H	L	I	Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V
Query Conservation
Alig confidence										.	.																																																			.	.
Template Conservation										.	.																																																			.	.
Template Sequence		F	D	E	V	M	T	G	F	.	.	R	I	A	Y	G	G	V	Q	E	K	F	G	V	T	P	D	L	T	T	L	G	K	I	I	G	G	G	L	P	V	G	A	Y	G	G	K	R	E	I	M	Q	L	V	A	P	A	G	P	M	Y	.	.	Q	A	G	T	L	S	G	N	P	L	A	M	T	A	G	I	K	T
Template Known Secondary structure					T	T	T	B	T	.	.	T	T	B	T	T						T	T				S						G	G	G	G	T	T	S													T	T	B	T	T	T	S	S	B		.	.				T	T	T	T
Template Predicted Secondary structure										.	.																																																			.	.
Template SS confidence
		244	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.						310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.														.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	S	D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	.	.	.	.	.	P	F	T	L	A	D	S	C	S	A	I	Q	P	L	I	V	G	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W
Query Conservation																													.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	L	L	R	Q	P	G	T	Y	E	Y	L	D	Q	I	T	K	R	L	S	D	G	L	L	A	I	A	Q	E	T	G	H	A	A	C	G	G	Q	V	S	G	M	F	G	F	F	F	T	E	G	P	V	H	N	Y	E	D	A	K	K	S	D	L	Q	K	F	S	R	F	H	R	G	M	L	E	Q	G	I	Y
Template Known Secondary structure						T	S	T	T																							T	T									T	T						S	S	S					S					T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	I	R	P	P	T	V	P	A	G	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G	N
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.
Template Sequence		L	A	P	S	.	.	.	.	.	.	.	.	.	Q	F	E	A	G	F	T	S	L	A	H	T	E	E	D	I	D	A	T	L	A	A	A	R	T	V
Template Known Secondary structure				S	S	.	.	.	.	.	.	.	.	.	T	T	S						T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.
Template SS confidence
		400	.	.	.										.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low