 |
Job Description | P12998 | Confidence | 21.36% | Date | Wed Jan 25 15:20:38 GMT 2012 |
Rank | 364 | Aligned Residues | 31 |
% Identity | 13% | Template | d2fhfa5 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 1.65 |
|
  |   |
177 | . | . | 180 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 190 | . | . | . | . | . | . | |
. | . | . | 200 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | F | S | M | D | G | D | . |
. |
. |
. |
. |
. |
. |
S | A | P | L | A | E | I | Q | Q | V | T | Q | Q | . |
H | N | G | W | L | M | V | D | D | A | H |
Query Conservation |   |
  |   |   |   |   |
|   | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|   |   |   | . |   |
|   |   |
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|
|
|   |
|
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |
Template Sequence |   |
P | E | G | S | Y | A | T | D | P | E | G | T | A | R | I | K | E | F | R | T | M | I | Q | A | I | K | Q | D | L | G | M | N | V | I | M | D | V | V | Y |
Template Known Secondary structure |   |
 |
| S | T | T | S | S |
|
| S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|  |  |  |  |  |  |
| T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
567 | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|