Job Description P12998 Confidence 99.97% Date Wed Jan 25 15:20:38 GMT 2012 Rank 171 Aligned Residues 321 % Identity 12% Template d2c0ra1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.2

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.
Predicted Secondary structure																		.																													.	.	.	.	.																				.	.	.	.
Query SS confidence																		.																													.	.	.	.	.																				.	.	.	.
Query Sequence		R	Q	Y	L	N	F	S	S	N	D	Y	L	G	L	S	H	.	H	P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	.	.	.	.	.	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	S	R	.	.	.	.	A	L	L	F	I	S	G
Query Conservation																		.																													.	.	.	.	.																				.	.	.	.
Alig confidence									.	.	.	.						.																	.												.	.	.	.	.																				.	.	.	.
Template Conservation									.	.	.	.																							.
Template Sequence		E	R	A	Y	N	F	N	.	.	.	.	A	G	P	A	A	L	P	L	E	V	L	E	R	A	Q	A	E	F	V	D	Y	Q	.	H	T	G	M	S	I	M	E	M	S	H	R	G	A	V	Y	E	A	V	H	N	E	A	Q	A	R	L	L	A	L	L	G	N	P	T	G	Y	K	V	L	F	I	Q	G	G	A
Template Known Secondary structure									.	.	.	.	S	S	S														T	S	S	S	S	T	.	T	S	S	S		G	G	G	S		T	T	S																		T	T			S	S							S	S
Template Predicted Secondary structure									.	.	.	.																							.
Template SS confidence
		3	.	.	.	.	.	.					10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																													.	.																						.	.									.
Query SS confidence																													.	.																						.	.									.
Query Sequence		F	A	A	N	Q	A	V	I	A	A	M	M	A	K	E	D	R	I	A	A	D	R	L	S	H	A	S	.	.	L	L	E	A	A	S	L	S	P	S	Q	L	R	R	F	A	H	N	D	V	T	.	.	H	L	A	R	L	L	A	S	.	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D
Query Conservation																													.	.																						.	.									.
Alig confidence																													.	.																						.	.									.
Template Conservation
Template Sequence		S	T	Q	F	A	M	I	P	M	N	F	L	K	E	G	Q	T	A	N	Y	V	M	T	G	S	W	A	S	K	A	L	K	E	A	K	L	I	G	D	T	H	V	A	A	S	S	E	A	S	N	Y	M	T	L	P	K	L	Q	E	I	Q	L	Q	D	N	A	A	Y	L	H	L	T	S	N	E	T	I	E	G	A
Template Known Secondary structure															T	T									S														S									G	G	G	T	T		S				G	G	G					T	T								S			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.																		.	.	.
Query SS confidence																																																													.																		.	.	.
Query Sequence		S	A	P	L	A	E	I	Q	Q	V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S	G	.	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	.	.	.
Query Conservation																																																													.																		.	.	.
Alig confidence					.	.	.	.	.																											.	.	.	.	.	.	.	.																		.																		.	.	.
Template Conservation					.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Sequence		Q	F	K	.	.	.	.	.	A	F	P	D	T	G	S	V	P	L	I	G	D	M	S	S	D	I	L	S	R	P	F	D	L	N	.	.	.	.	.	.	.	.	Q	F	G	L	V	Y	A	G	A	Q	K	N	L	G	P	S	G	V	T	V	V	I	V	R	E	D	L	V	A	E	S	P	K	H	L	P	T	M
Template Known Secondary structure				S	.	.	.	.	.	S					T	T	S							T	T	T	T	T	S	S				G	G	.	.	.	.	.	.	.	.	G		S						T	T	T	T	T			S	S								G	G	G	S	S	S			T	T	S		G	G
Template Predicted Secondary structure					.	.	.	.	.																											.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.									.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
									260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310							.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																													.																								.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																													.																								.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	R	H	L	I	Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	E	.	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	P	.	.	.	.	.	.	F	T	L	A	D	S	C	S	A	I	Q	P	L	I	V
Query Conservation		.	.	.	.	.	.	.																													.																								.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																													.																								.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	Y	D	T	Y	V	K	N	N	S	L	Y	N	T	P	P	S	F	G	I	Y	M	V	N	E	V	L	K	W	I	E	E	R	G	G	L	E	G	V	Q	Q	A	N	R	K	K	A	S	L	I	Y	D	A	I	D	Q	S	G	G	F	Y	R	G	C	V	D	V	D	S	R	S	D	M	N	I	T	F	R	L
Template Known Secondary structure		G								T	T	T		S	S																				T	T																						T	S	T	T	S	S			S	S		G	G	G	B		S	S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W	V	T	A	I	R	P	P	T	V	P	A	G	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G
Query Conservation
Alig confidence																										.	.	.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		A	S	E	E	L	E	K	E	F	V	K	A	S	E	Q	E	G	F	V	G	L	K	G	H	.	.	.	.	.	R	S	V	G	G	L	R	A	S	I	Y	N	A	V	P	Y	E	S	C	E	A	L	V	Q	F	M	E	H
Template Known Secondary structure		S															T	T			S		B			.	.	.	.	.	T	T	T		S							T	T	S
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.						.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions