Job Description P12998 Confidence 99.94% Date Wed Jan 25 15:20:38 GMT 2012 Rank 218 Aligned Residues 311 % Identity 15% Template d2a7va1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.04

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		39	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure								.																																																										.	.	.	.	.
Query SS confidence								.																																																										.	.	.	.	.
Query Sequence		R	Q	Y	L	N	F	.	S	S	N	D	Y	L	G	L	S	H	H	P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	S	R	.	.	.	.	.	A	L	L	F	I	S	G	F	A	A	N
Query Conservation								.																																																										.	.	.	.	.
Alig confidence								.								.	.	.	.									.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Conservation																.	.	.	.									.	.	.	.	.	.	.	.
Template Sequence		C	R	G	L	E	L	I	A	S	E	N	F	C	S	.	.	.	.	R	A	A	L	E	A	L	G	.	.	.	.	.	.	.	.	S	C	L	N	N	K	Y	S	E	G	V	D	E	I	E	L	L	C	Q	R	R	A	L	E	A	F	D	L	D	P	A	Q	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N
Template Known Secondary structure				S					T	T						.	.	.	.								T	.	.	.	.	.	.	.	.	S	G	G	G	T							T														T	T			T	T	T								S	S
Template Predicted Secondary structure																.	.	.	.									.	.	.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.									.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	V	I	A	A	M	M	A	K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	A	A	S	L	S	P	S	Q	L	R	R	F	A	H	N	D	V	T	H	L	A	R	L	L	A	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	P	L	A	E	I	Q	Q
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Sequence		L	A	V	Y	T	A	L	L	Q	P	H	D	R	I	M	G	Y	K	L	N	P	K	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	D	Y	N	Q	L	A	L	T	A	R	L	F	R	P	R	L	I	I	A	.	.	.	.	G	T	S	A	Y	A	R	L	I	D	Y	A	R	M	R	E
Template Known Secondary structure											S									B		T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	B															S					.	.	.	.			S	S			S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.																.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250																.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S	G	A	A	V	L	C	S	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	D	Y	L	L	Q
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.
Template Sequence		V	C	D	E	V	K	A	H	L	L	A	D	M	A	H	I	S	G	L	V	A	A	K	V	I	P	S	P	F	.	.	.	K	H	A	D	I	V	T	T	T	T	H	K	T	L	R	G	A	R	S	G	L	I	F	Y	R	K	G	V	K	A	V	D	P	K	T	G	R	E	I	P	Y	T	F	E	D	R	I	N
Template Known Secondary structure						T	T								G	G	G						T	T	S	S			G	G	.	.	.	G	T		S						S	S	G	G	G		S		S									S						T	T	T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.				.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.
Predicted Secondary structure																																																													.	.										.
Query SS confidence																																																													.	.										.
Query Sequence		F	A	R	H	L	I	Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	P	F	T	L	A	D	S	.	.	C	S	A	I	Q	P	L	I	V	.	G	D	N	S	R	A	L	Q	L
Query Conservation																																																													.	.										.
Alig confidence																																																													.	.										.
Template Conservation
Template Sequence		F	A	V	F	P	S	L	Q	G	G	P	H	N	H	A	I	A	A	V	A	V	A	L	K	Q	A	C	T	P	M	F	R	E	Y	S	L	Q	V	L	K	N	A	R	A	M	A	D	A	L	L	E	R	G	Y	S	L	V	S	G	G	T	D	N	H	L	V	L	V	D	L	R	P	K	G	L	D	G	A	R	A
Template Known Secondary structure					T	T	T	T			S																		S																								T	T				G	G	G	S		S	S	S							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.			.	.	.	.	.	.	.	360	.	.	.	.	.					.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																				.	.														.	.	.	.
Query SS confidence																				.	.														.	.	.	.
Query Sequence		A	E	K	L	R	Q	Q	G	C	W	V	T	A	I	R	P	P	T	.	.	V	P	A	G	T	A	R	L	R	L	T	L	T	.	.	.	.	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G	N
Query Conservation																				.	.														.	.	.	.
Alig confidence																				.	.														.	.	.	.
Template Conservation
Template Sequence		E	R	V	L	E	L	V	S	I	T	A	N	K	N	T	C	P	G	D	R	S	A	I	T	P	G	G	L	R	L	G	A	P	A	L	T	S	R	Q	F	R	E	D	D	F	R	R	V	V	D	F	I	D	E	G
Template Known Secondary structure								T	T									T	T				S	S	S		S						S						T	T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions