Job Description P12998 Confidence 99.95% Date Wed Jan 25 15:20:38 GMT 2012 Rank 206 Aligned Residues 310 % Identity 13% Template d1w23a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.08

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.																		.	.	.									.
Query SS confidence																															.	.	.	.																		.	.	.									.
Query Sequence		H	P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	.	.	.	.	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	S	.	.	.	R	A	L	L	F	I	S	G	.	F	A	A	N	Q	A	V	I	A	A	M	M	A	K	E	D	R	I
Query Conservation																															.	.	.	.																		.	.	.									.
Alig confidence																															.	.	.	.																		.	.	.									.
Template Conservation
Template Sequence		P	K	P	A	L	E	R	A	Q	K	E	L	L	N	F	N	D	T	Q	M	S	V	M	E	L	S	H	R	S	Q	S	Y	E	E	V	H	E	Q	A	Q	N	L	L	R	E	L	L	Q	I	P	N	D	Y	Q	I	L	F	L	Q	G	G	A	S	L	Q	F	T	M	L	P	M	N	L	L	T	K	G	T	I	G
Template Known Secondary structure												T	S	S	S	S	T	T	S	S	S		G	G	G	S		T	T	S																			T			T	T							S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.					.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																					.	.	.	.																				.
Query SS confidence																					.	.	.	.																				.
Query Sequence		A	A	D	R	L	S	H	A	S	L	L	E	A	A	S	L	S	P	S	.	.	.	.	Q	L	R	R	F	A	H	N	D	V	T	H	L	A	R	L	L	A	S	.	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	P	L	A	E	I	Q	Q	V	T	Q	Q	H	N	G	W	L
Query Conservation																					.	.	.	.																				.
Alig confidence																					.	.	.	.																				.																							.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.
Template Sequence		N	Y	V	L	T	G	S	W	S	E	K	A	L	K	E	A	K	L	L	G	E	T	H	I	A	A	S	T	K	A	N	S	Y	Q	S	I	P	D	F	S	E	F	Q	L	N	E	N	D	A	Y	L	H	I	T	S	N	N	T	I	Y	G	T	Q	Y	Q	.	.	.	.	.	N	F	P	E	I	N	H	A	P	L
Template Known Secondary structure							S												T	T	S									G	G	G	T	S		S				G	G	G					T	T								S			T	T	T	T				S	.	.	.	.	.	S						S	S
Template Predicted Secondary structure																																																																			.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.											.	.	.	.	.	.	.	270
Predicted Secondary structure																																											.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S	G	.	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	R	H	L	.	.	.	.	.	.	.	.	.	.	I	Y	S	T	S	M	P	P
Query Conservation																																											.																					.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.																		.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.
Template Sequence		I	A	D	M	S	S	D	I	L	S	R	P	L	K	V	N	.	.	.	.	.	.	.	.	Q	F	G	M	I	Y	A	G	A	Q	K	N	L	G	P	S	G	V	T	V	V	I	V	K	K	D	L	L	N	T	K	V	E	Q	V	P	T	M	L	Q	Y	A	T	H	I	K	S	D	S	L	Y	N	T	P	P	T
Template Known Secondary structure						T	T	T	T	T	S	S				G	G	.	.	.	.	.	.	.	.	G		S						T	T	T	T	T	S		T	T													S			T	T			G	G	G								T	T	T		S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.									.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320						.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																		.																								.												.	.	.	.	.
Query SS confidence																		.																								.												.	.	.	.	.
Query Sequence		A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	.	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	.	P	F	T	L	A	D	S	C	S	A	I	.	.	.	.	.	Q	P	L	I	V	G	D	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C
Query Conservation																		.																								.												.	.	.	.	.
Alig confidence																		.																								.												.	.	.	.	.
Template Conservation
Template Sequence		F	S	I	Y	M	L	R	N	V	L	D	W	I	K	D	L	G	G	A	E	A	I	A	K	Q	N	E	E	K	A	K	I	I	Y	D	T	I	D	E	S	N	G	F	Y	V	G	H	A	E	K	G	S	R	S	L	M	N	V	T	F	N	L	R	N	E	E	L	N	Q	Q	F	L	A	K	A	K	E	Q	G	F
Template Known Secondary structure																	T	T																						T	T	T	T	S	S			S	S		G	G	G	B		S	S							S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	T	A	I	R	P	P	T	V	P	A	G	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G
Query Conservation
Alig confidence											.	.	.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		V	G	L	N	G	H	R	S	V	.	.	.	.	.	G	G	C	R	A	S	I	Y	N	A	V	P	I	D	A	C	I	A	L	R	E	L	M	I	Q
Template Known Secondary structure			S		B			T	T	T	.	.	.	.	.		S							T	T	S
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330						.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions