Job Description P12998 Confidence 100.00% Date Wed Jan 25 15:20:38 GMT 2012 Rank 21 Aligned Residues 359 % Identity 18% Template d1vefa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.35

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																.													.	.	.
Query SS confidence																																.													.	.	.
Query Sequence		E	K	I	N	A	A	L	D	A	R	R	A	A	D	A	L	R	R	R	Y	P	V	A	Q	G	A	G	R	W	L	.	V	A	D	D	R	Q	Y	L	N	F	S	S	.	.	.	N	D	Y	L	G	L	S	H	H	P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S
Query Conservation																																.													.	.	.
Alig confidence																																.													.	.	.							.																									.	.	.
Template Conservation																																																						.																									.	.	.
Template Sequence		R	A	L	L	E	A	E	K	T	L	D	S	G	V	Y	N	K	H	D	L	L	I	V	R	G	Q	G	A	R	V	W	D	A	E	G	N	E	Y	I	D	C	V	G	G	Y	G	V	A	N	L	G	H	.	G	N	P	E	V	V	E	A	V	K	R	Q	A	E	T	L	M	A	M	P	Q	T	L	P	.	.	.
Template Known Secondary structure												S		S		S				S	S							B	T					T	T	S						S	S					T		T	T		B	.	T																				T	T	S		.	.	.
Template Predicted Secondary structure																																																						.																									.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.																					.	.	.																													.	.	.	.	.	.	.
Query SS confidence																						.	.																					.	.	.																													.	.	.	.	.	.	.
Query Sequence		G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	S	.	.	R	A	L	L	F	I	S	G	F	A	A	N	Q	A	V	I	A	A	M	M	.	.	.	A	K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	A	A	S	L	S	P	S	Q	L	R	.	.	.	.	.	.	.
Query Conservation																						.	.																					.	.	.																													.	.	.	.	.	.	.
Alig confidence		.	.																			.	.																					.	.	.																													.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	T	P	M	R	G	E	F	Y	R	T	L	T	A	I	L	P	P	E	L	N	R	V	F	P	V	N	S	G	T	E	A	N	E	A	A	L	K	F	A	R	A	H	T	G	R	K	K	F	V	A	A	M	R	G	F	S	G	R	T	M	G	S	L	S	V	T	W	E	P	K	Y	R	E	P	F	L	P	L
Template Known Secondary structure		.	.														T	S		T	T								S	S																	S								T	T					S	S						T								G	G	G		S
Template Predicted Secondary structure		.	.
Template SS confidence
				86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
				149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.	.																																							.	.	.	.
Query SS confidence		.	.																																							.	.	.	.
Query Sequence		.	.	R	F	A	H	N	D	V	T	H	L	A	R	L	L	A	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	P	.	.	.	.	L	A	E	I	Q	Q	V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L
Query Conservation		.	.																																							.	.	.	.
Alig confidence		.	.																																							.	.	.	.																						.
Template Conservation																																																																			.
Template Sequence		V	E	P	V	E	F	I	P	Y	N	D	V	E	A	L	K	R	A	V	D	E	E	T	A	A	V	I	L	E	P	V	Q	G	E	G	G	V	R	P	A	T	P	E	F	L	R	A	A	R	E	I	T	Q	E	K	G	A	L	L	I	L	D	E	I	Q	.	T	G	M	G	R	T	G	K	R	F	A	F	E	H
Template Known Secondary structure		S	S							T	T											T	T								S			T	T	T	T	S																			T								T	T	.	T	T	T	T	T	T	S	S	S	S	T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	V	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S	G	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	R	H	L	I	Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F
Query Conservation
Alig confidence																																						.	.	.	.	.
Template Conservation																																						.	.	.	.	.
Template Sequence		F	G	I	V	P	D	I	L	T	L	A	K	A	L	G	G	G	V	P	L	G	V	A	V	M	R	E	E	V	A	R	S	M	P	K	G	.	.	.	.	.	G	H	G	T	T	F	G	G	N	P	L	A	M	A	A	G	V	A	A	I	R	Y	L	E	R	T	R	L	W	E	R	A	A	E	L	G	P	W	F
Template Known Secondary structure			T				S						G	G	G	G	T	T	S	S													T	S		T	T	.	.	.	.	.	S	S			S	S	T	T																			T	T
Template Predicted Secondary structure																																						.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.						.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.				.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		R	A	G	V	Q	D	L	P	F	T	L	.	.	.	A	D	S	C	S	A	I	Q	P	L	I	V	G	D	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W	V	T	A	I	R	P	P	T	V	P	A	G	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V
Query Conservation													.	.	.
Alig confidence													.	.	.																.																			.	.	.	.	.	.	.
Template Conservation																															.																			.	.	.	.	.	.	.
Template Sequence		M	E	K	L	R	A	I	P	S	P	K	I	R	E	V	R	G	M	G	L	M	V	G	L	E	L	K	E	K	.	A	A	P	Y	I	A	R	L	E	K	E	H	R	V	L	A	L	Q	.	.	.	.	.	.	.	A	G	P	T	V	I	R	F	L	P	P	L	V	I	E	K	E	D	L	E	R	V	V	E	A
Template Known Secondary structure							T	S			T	T								T	T							S	S		.	S																		.	.	.	.	.	.	.	S	S	T	T								T	T
Template Predicted Secondary structure																															.																			.	.	.	.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.								.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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