Job Description P12998 Confidence 100.00% Date Wed Jan 25 15:20:38 GMT 2012 Rank 76 Aligned Residues 346 % Identity 17% Template d1qz9a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.85

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		A	A	L	D	A	R	R	A	A	D	A	L	R	R	R	Y	P	V	A	Q	G	A	G	R	W	L	V	A	D	D	R	Q	Y	L	N	F	S	S	N	D	Y	L	G	L	S	H	H	P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	.	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q
Query Conservation																																																															.
Alig confidence																					.	.	.	.	.	.	.	.	.											.	.	.				.																	.
Template Conservation																					.	.	.	.	.	.	.	.	.											.	.	.				.
Template Sequence		L	A	L	D	A	Q	D	S	L	A	P	L	R	Q	Q	F	A	L	P	.	.	.	.	.	.	.	.	.	E	G	V	I	Y	L	D	G	N	S	.	.	.	L	G	A	.	R	P	V	A	A	L	A	R	A	Q	A	V	I	A	E	E	W	G	N	G	L	I	R	S	W	N	S	A	G	W	R	D	L	S	E
Template Known Secondary structure							T		T	T	G	G	G	G	G	G	B				.	.	.	.	.	.	.	.	.	T	T						T	T	T	.	.	.	S			.		B	T	T											T						G	G	G					T	S	G	G	G
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.											.	.	.				.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.										.	.	.	30	.	.	.	.	.	.				.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																					.	.	.	.	.	.	.																							.
Query SS confidence														.	.																					.	.	.	.	.	.	.																							.
Query Sequence		A	L	E	E	E	L	A	E	W	L	G	Y	.	.	S	R	A	L	L	F	I	S	G	F	A	A	N	Q	A	V	I	A	A	M	.	.	.	.	.	.	.	M	A	K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	A	A	S	.	L	S	P	S	Q	L	R	R	F	A	H	N	D	V	T	H
Query Conservation														.	.																					.	.	.	.	.	.	.																							.
Alig confidence														.	.																					.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		R	L	G	N	R	L	A	T	L	I	G	A	R	D	G	E	V	V	V	T	D	T	T	S	I	N	L	F	K	V	L	S	A	A	L	R	V	Q	A	T	R	S	P	E	R	R	V	I	V	T	E	T	S	N	F	P	T	D	L	Y	I	A	E	G	L	A	D	M	L	Q	Q	G	Y	T	L	R	L	V	D	S
Template Known Secondary structure									T	T	T	T			T	T	S					S																					S	T	T								T	T	S																	S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	R	L	L	A	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	P	L	A	E	I	Q	Q	V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	K	P	E	L	L	V	V	T	F	G	K	G
Query Conservation
Alig confidence																																																												.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.
Template Sequence		P	E	E	L	P	Q	A	I	D	Q	D	T	A	V	V	M	L	T	H	V	N	Y	K	T	G	Y	M	H	D	M	Q	A	L	T	A	L	S	H	E	C	G	A	L	A	I	W	D	L	A	H	S	A	G	A	V	P	V	D	.	.	.	.	.	.	L	H	Q	A	G	A	D	Y	A	I	G	C	T	Y	K	Y
Template Known Secondary structure		G	G	G						S	T	T								S	B		T	T	T		B	B														T								T	T	T	T	T	T	S				.	.	.	.	.	.					T		S						S	S	S	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.							.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		238	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.																						.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure					.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	G	V	.	.	.	S	G	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	R	H	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	E	G	D	A	R	R	E
Query Conservation					.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	G	G	P	G	S	Q	A	F	V	W	V	S	P	Q	L	C	D	L	V	P	Q	P	L	S	G	W	F	G	H	S	R	Q	F	A	M	E	P	R	Y	E	P	S	N	G	I	A	R	Y	L	C	G	T	Q	P	I	T	S	L	A	M	V	E	C	G	L	D	V	F	A	Q	T	D	M	A	S	L	R	R
Template Known Secondary structure		T				T	T									T	T	T	T	T	T	S			S				G	G	G	B		T	T	S				S	S			B		S	S	G	G	G	G			S																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.					310	.	.	.	.	.	.	.						.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																		.	.	.	.									.	.	.	.	.
Query SS confidence																		.	.	.	.									.	.	.	.	.
Query Sequence		K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	.	.	.	.	P	F	T	L	A	D	S	C	.	.	.	.	.	S	A	I	Q	P	L	I	V	G	D	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W	V	T	A	I	R	P	P	T	V	P	A	G	T	A	R	L	R	L	T	L
Query Conservation																		.	.	.	.									.	.	.	.	.
Alig confidence																		.	.	.	.									.	.	.	.	.											.	.	.																		.	.	.	.	.	.	.
Template Conservation																																													.	.	.																		.	.	.	.	.	.	.
Template Sequence		K	S	L	A	L	T	D	L	F	I	E	L	V	E	Q	R	C	A	A	H	E	L	T	L	V	T	P	R	E	H	A	K	R	G	S	H	V	S	F	E	H	P	E	.	.	.	G	Y	A	V	I	Q	A	L	I	D	R	G	V	I	G	D	Y	.	.	.	.	.	.	.	R	E	P	R	I	M	R	F	G	F
Template Known Secondary structure																			T	T	S						S		S	S	G	G	G	B		S							T	T	.	.	.										T	T	T						.	.	.	.	.	.	.		T	T	T
Template Predicted Secondary structure																																													.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.				.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.								.	370	.	.	.	.	.	.	.	.
			365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G	N
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		T	P	L	Y	T	T	F	T	E	V	W	D	A	V	Q	I	L	G	E	I
Template Known Secondary structure			T	T	T
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions