Job Description P12998 Confidence 100.00% Date Wed Jan 25 15:20:38 GMT 2012 Rank 98 Aligned Residues 305 % Identity 13% Template d1qgna_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.90

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	S	R	A	L	L	F	I	S	G	F	A	A	N	Q	A	V	I	A	A	M	M	A	K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	A	A	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		T	S	E	L	I	D	F	K	E	K	R	R	A	S	F	E	Y	G	R	Y	G	N	P	T	T	V	V	L	E	E	K	I	S	A	L	E	G	A	E	S	T	L	L	M	A	S	G	M	C	A	S	T	V	M	L	L	A	L	V	P	A	G	G	H	I	V	T	T	T	D	C	Y	R	K	T	R	I	F	I	E
Template Known Secondary structure										T	T	S	S					B	G	G	G																	T		S						S														S		S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
					141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	S	L	S	P	S	Q	L	R	R	F	A	H	N	D	V	T	H	L	A	R	L	L	A	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	P	L	A	E	I	Q	Q	V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R
Query Conservation		.	.	.
Alig confidence		.	.	.																									.	.
Template Conservation																													.	.
Template Sequence		T	I	L	P	K	M	G	I	T	A	T	V	I	D	P	A	D	V	G	A	L	E	L	A	L	N	Q	.	.	K	K	V	N	L	F	F	T	E	S	P	T	N	P	F	L	R	C	V	D	I	E	L	V	S	K	L	C	H	E	K	G	A	L	V	C	I	D	G	T	F	A	T	P	L	N	Q	K	A	L	A
Template Known Secondary structure			T	G	G	G	G	T								S	S												.	.	S									S	S		T	T	T																T	T								T	T	T		T	T	T			T	T	T
Template Predicted Secondary structure																													.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		G	S	C	W	L	Q	K	V	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S	G	.	.	.	.	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	R	H	L	I	Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	E	G	D	A	R	R	E
Query Conservation																											.	.	.	.
Alig confidence			.	.	.	.	.	.	.																		.	.	.	.																										.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.																																															.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	.	.	.	G	A	D	L	V	L	H	S	A	T	K	F	L	G	G	H	N	D	V	L	A	G	C	I	S	G	P	L	K	L	V	S	E	I	R	N	L	H	H	I	L	G	G	A	L	N	.	.	.	.	.	.	.	P	N	A	A	Y	L	I	I	R	G	M	K	T	L	H	L	R	V	Q
Template Known Secondary structure		T	.	.	.	.	.	.	.	T		S						T	T	T	T	T	T		S	S	S																													.	.	.	.	.	.	.											G	G	G
Template Predicted Secondary structure			.	.	.	.	.	.	.																																															.	.	.	.	.	.	.
Template SS confidence
		250								.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.								.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.																				.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	P	F	T	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	C	S	A	I	Q	P	L	I	V	G	.	D	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W	V	T	A	I	R	P	P	T	V
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		Q	Q	N	S	T	A	L	R	M	A	E	I	L	E	A	H	P	K	V	R	H	V	Y	Y	P	G	L	Q	S	H	P	E	H	H	I	A	K	K	Q	M	T	G	F	G	G	A	V	S	F	E	V	D	G	D	L	L	T	T	A	K	F	V	D	A	L	K	I	P	Y	I	A	P	S	F	G	G	C	E	S	I
Template Known Secondary structure																T		T	T							T	T	S	S	S	S	T	T									S				S							S	S													S	S	S				S				S	S	S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		354	.																					.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	Q	P	A	I	M	S	Y	W	D	L	S	Q	S	D	R	A	K	Y	G	I	M	D	N	L	V	R	F	S	F	G	V	E	D	F	D	D	L	K	A	D	I	L	Q	A	L	D	S
Template Known Secondary structure										S	T	T	S							T	T	T			S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions