Job Description P12998 Confidence 100.00% Date Wed Jan 25 15:20:38 GMT 2012 Rank 63 Aligned Residues 356 % Identity 17% Template d1kl1a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.93

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.																							.
Query SS confidence																																														.																							.
Query Sequence		M	S	W	Q	E	K	I	N	A	A	L	D	A	R	R	A	A	D	A	L	R	R	R	Y	P	V	A	Q	G	A	G	R	W	L	V	A	D	D	R	Q	Y	L	N	F	.	S	S	N	D	Y	L	G	L	S	H	H	P	Q	I	I	R	A	W	Q	Q	G	A	.	E	Q	F	G	I	G	S	G	G	S	G	H
Query Conservation																																														.																							.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.							.	.	.	.													.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		M	K	Y	L	P	Q	Q	D	P	Q	V	F	A	A	I	E	Q	E	R	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	H	A	K	I	E	L	I	A	S	E	N	F	V	.	.	.	.	S	R	A	V	M	E	A	Q	G	S	V	L	T	N	K	Y	A	E	G	Y	P	G	R	R	Y
Template Known Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S					T	T					.	.	.	.									T	S	G	G	G	G							T	T			S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.																	.	.	.	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		79	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure												.	.	.															.																																.	.	.
Query SS confidence												.	.	.															.																																.	.	.
Query Sequence		V	S	G	Y	S	V	V	H	Q	A	.	.	.	L	E	E	E	L	A	E	W	L	G	Y	S	R	A	.	L	L	F	I	S	G	F	A	A	N	Q	A	V	I	A	A	M	M	A	K	E	D	R	I	A	A	D	R	L	S	H	.	.	.	A	S	L	L	E	A	A	S	L	S	P	S	Q	L	R	R	F	A
Query Conservation												.	.	.															.																																.	.	.
Alig confidence												.	.	.															.																																.	.	.
Template Conservation
Template Sequence		Y	G	G	C	E	Y	V	D	I	V	E	E	L	A	R	E	R	A	K	Q	L	F	G	A	E	H	A	N	V	Q	P	H	S	G	A	Q	A	N	M	A	V	Y	F	T	V	L	E	H	G	D	T	V	L	G	M	N	L	S	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	V	Q	Y	N	F	V	A
Template Known Secondary structure		S	S																							S							S	S															T	T								G	G	G	T			G	G	G	T		T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		152	.									.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.
Query Sequence		H	N	.	.	.	.	.	.	.	.	D	V	T	H	L	A	R	L	L	A	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	P	L	A	E	I	Q	Q	V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q
Query Conservation				.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation																										.	.	.	.
Template Sequence		Y	G	V	D	P	E	T	H	V	I	D	Y	D	D	V	R	E	K	A	R	L	H	R	P	.	.	.	.	K	L	I	V	A	A	A	S	A	Y	P	R	I	I	D	F	A	K	F	R	E	I	A	D	E	V	G	A	Y	L	M	V	D	M	A	H	I	A	G	L	V	A	A	G	L	H	P	N	P	V	P	Y
Template Known Secondary structure				B		T	T	T		S	B															.	.	.	.	S							S	S			S															T								T	T	T						T	T	S	S			S	T	T	T
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S	G	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	R	H	L	I	Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	A	H	F	V	T	T	T	T	H	K	T	L	R	G	P	R	G	G	M	I	L	C	Q	E	Q	F	A	K	Q	I	D	K	A	I	F	P	G	I	Q	G	G	P	L	M	H	V	I	A	A	K	A	V	A	F	G	E	A	L	Q	D	D	F	K	A	Y	A	K	R	V	V	D	N	A	K	R	L	A
Template Known Secondary structure		.	.	.		S						S	S	S	T	T				S																			T	T	T	T		S	S																		S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.				.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.				.	.	360	.	.	.	.	.					.	.	.	.	370	.	.	.
Predicted Secondary structure																	.	.	.																																								.	.	.									.	.	.	.
Query SS confidence																	.	.	.																																								.	.	.									.	.	.	.
Query Sequence		A	G	V	Q	D	L	P	F	T	L	A	D	S	C	S	.	.	.	A	I	Q	P	L	I	V	G	D	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W	V	T	A	I	R	P	P	T	V	P	A	G	T	.	.	.	A	R	L	R	L	T	L	T	.	.	.	.	A	A	H	E	M	Q	D	I
Query Conservation																	.	.	.																																								.	.	.									.	.	.	.
Alig confidence																	.	.	.																																								.	.	.									.	.	.	.
Template Conservation
Template Sequence		S	A	L	Q	N	E	G	F	T	L	V	S	G	G	T	D	N	H	L	L	L	V	D	L	R	P	Q	Q	L	T	G	K	T	A	E	K	V	L	D	E	V	G	I	T	V	N	K	N	T	I	P	Y	D	P	E	S	P	F	V	T	S	G	I	R	I	G	T	A	A	V	T	T	R	G	F	G	L	E	E	M
Template Known Secondary structure							T	T				G	G	G	S		S	S	S							G	G	G	T														T									T	T		S	S		T	T	T		S												T	T
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		374	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	L	L	E	V	L	H	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	I	A	A	I	I	G	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		374	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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