Job Description P12998 Confidence 100.00% Date Wed Jan 25 15:20:38 GMT 2012 Rank 126 Aligned Residues 340 % Identity 14% Template d1js3a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase Resolution 2.25

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		42	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.												.	.	.	.	.	.	.
Predicted Secondary structure													.															.																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.															.																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	F	S	S	N	D	Y	L	G	L	.	S	H	H	P	Q	I	I	R	A	W	Q	Q	G	A	.	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	S	R	.	.	.	.	.	.	.	.	.	.	.	A	L	L	F	I	S	G
Query Conservation													.															.																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.															.																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	H	W	H	S	P	Y	F	F	A	Y	F	P	T	A	S	S	Y	P	A	M	L	A	D	M	L	C	G	A	I	G	C	I	G	F	S	W	A	A	S	P	A	C	T	E	L	E	T	V	M	M	D	W	L	G	K	M	L	Q	L	P	E	A	F	L	A	G	E	A	G	E	G	G	G	V	I	Q	G	S	A
Template Known Secondary structure				T	T	S	T	T	B		S	S	S																							S	S	G	G	G																			T	T			G	G	G			T	T	T		S							S
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.																				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Query Sequence		F	A	A	N	Q	A	V	I	A	A	M	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	A	A	S	L	S	P	S	Q	L	R	R	F	A	H	N	.	.	.	.	.	D	V	T	H	L	A	R	L	L	A	S
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template Conservation
Template Sequence		S	E	A	T	L	V	A	L	L	A	A	R	T	K	V	V	R	R	L	Q	A	A	S	P	G	L	T	Q	G	A	V	L	E	K	L	V	A	Y	A	S	D	Q	A	H	S	S	V	E	R	A	G	L	I	G	G	V	K	L	K	A	I	P	S	D	G	K	F	A	M	R	A	S	A	L	Q	E	A	L	E	R
Template Known Secondary structure																								S	T	T																T	T													T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		165	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		P	C	.	.	.	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	P	L	A	E	I	Q	Q	V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S
Query Conservation				.	.	.
Alig confidence				.	.	.
Template Conservation
Template Sequence		D	K	A	A	G	L	I	P	F	F	V	V	A	T	L	G	T	T	S	C	C	S	F	D	N	L	L	E	V	G	P	I	C	H	E	E	D	I	W	L	H	V	D	A	A	Y	A	G	S	A	F	I	C	P	E	F	R	H	L	L	N	G	V	E	F	A	D	S	F	N	F	N	P	H	K	W	L	L	V	N
Template Known Secondary structure					T	T										B	S		T	T	T			B													T	T								T	T	G	G	G	G	G	G	S	T	T	T	G	G	G	G	T	T	G	G	G		S										S	S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.								.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.																																													.
Query SS confidence																										.	.	.	.	.	.	.																																													.
Query Sequence		G	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	R	H	L	I	Y	S	.	.	.	.	.	.	.	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	.	P	F	T	L
Query Conservation																										.	.	.	.	.	.	.																																													.
Alig confidence																										.	.	.	.	.	.	.																																													.
Template Conservation
Template Sequence		F	D	C	S	A	M	W	V	K	R	R	T	D	L	T	G	A	F	K	S	G	L	I	T	D	Y	R	H	W	Q	L	P	L	G	R	R	F	R	S	L	K	M	W	F	V	F	R	M	Y	G	V	K	G	L	Q	A	Y	I	R	K	H	V	Q	L	S	H	E	F	E	A	F	V	L	Q	D	P	R	F	E	V
Template Known Secondary structure		S	S							S							G	G	G				S				G	G	G	S	S	S		S					T																																						T	T
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		314		.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure			.												.																																								.
Query SS confidence			.												.																																								.
Query Sequence		A	.	D	S	C	S	A	I	Q	P	L	I	V	.	G	D	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W	V	T	A	I	R	P	P	T	V	P	A	G	T	A	R	L	R	L	T	L	.	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G	N	G
Query Conservation			.												.																																								.
Alig confidence			.												.																					.	.	.																	.
Template Conservation																																				.	.	.
Template Sequence		C	A	E	V	T	L	G	L	V	C	F	R	L	K	G	S	D	G	L	N	E	A	L	L	E	R	I	N	S	A	R	K	I	H	.	.	.	L	V	P	C	R	L	R	G	Q	F	V	L	R	F	A	I	C	S	R	K	V	E	S	G	H	V	R	L	A	W	E	H	I	R	G	L	A
Template Known Secondary structure			S				S	S							S	S																T	S		B	.	.	.							T	T											T	T
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.				.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions