Job Description P12998 Confidence 99.98% Date Wed Jan 25 15:20:38 GMT 2012 Rank 139 Aligned Residues 297 % Identity 17% Template d1ibja_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.30

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.
Query SS confidence																																																																									.	.	.	.
Query Sequence		S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	S	R	A	L	L	F	I	S	G	F	A	A	N	Q	A	V	I	A	A	M	M	A	K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	A	A	S	L	S	.	.	.	.	P	S	Q	L	R
Query Conservation																																																																									.	.	.	.
Alig confidence																																														.																											.	.	.	.
Template Conservation																																														.
Template Sequence		N	G	P	Y	D	Y	T	R	S	G	N	P	T	R	D	A	L	E	S	L	L	A	K	L	D	K	A	D	R	A	F	C	F	T	S	G	M	A	A	L	S	A	V	T	.	H	L	I	K	N	G	E	E	I	V	A	G	D	D	V	Y	G	G	S	D	R	L	L	S	Q	V	V	P	R	S	G	V	V	V	K
Template Known Secondary structure				S		S	B	T	T	T																	T		S						S	S										.	T	T	S		T	T							S	S												T	S	G	G	G	T
Template Predicted Secondary structure																																														.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	A	H	N	D	V	T	H	L	A	R	L	L	A	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	P	L	A	E	I	Q	Q	V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	K	P	E
Query Conservation
Alig confidence								.	.	.																																																														.	.	.	.	.	.	.
Template Conservation								.	.	.																																																														.	.	.	.	.	.	.
Template Sequence		R	V	N	T	T	K	.	.	.	L	D	E	V	A	A	A	I	G	P	Q	T	K	L	V	W	L	E	S	P	T	N	P	R	Q	Q	I	S	D	I	R	K	I	S	E	M	A	H	A	Q	G	A	L	V	L	V	D	N	S	I	M	S	P	V	L	S	R	P	L	E	L	.	.	.	.	.	.	.	G	A	D
Template Known Secondary structure					T	T	S	.	.	.										S	S								S	S		T	T	T															T	T	T								T	T	T		T	T	T			G	G	G	T	.	.	.	.	.	.	.	T		S
Template Predicted Secondary structure								.	.	.																																																														.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.								.	.	270
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	V	V	T	F	G	K	G	F	G	V	S	G	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	R	H	L	I	Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D
Query Conservation
Alig confidence																															.	.
Template Conservation																															.	.
Template Sequence		I	V	M	H	S	A	T	K	F	I	A	G	H	S	D	V	M	A	G	V	L	A	V	K	G	E	K	L	A	.	.	K	E	V	Y	F	L	Q	N	S	E	G	S	G	L	A	P	F	D	C	W	L	C	L	R	G	I	K	T	M	A	L	R	I	E	K	Q	Q	E	N	A	R	K	I	A	M	Y	L	S	S
Template Known Secondary structure							T	T	T	T	T	T		S	S											S					.	.										T	T		B														T	T																					T
Template Predicted Secondary structure																															.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		309	310	.	.	.	.																				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	F	T	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	C	S	A	I	Q	P	L	I	V	G	D	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W	V	T	A	I	R	P	P	T	V	P	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	P	R	V	K	K	V	Y	Y	A	G	L	P	D	H	P	G	H	H	L	H	F	S	Q	A	K	G	A	G	S	V	F	S	F	I	T	G	S	V	A	L	S	K	H	L	V	E	T	T	K	Y	F	S	I	A	V	S	F	G	S	V	K	S	L	I	S	M	P	C	F	M	S	H	A	S	I	P	A	E	V
Template Known Secondary structure			T	T							T	T	S	T	T	S	T	T					T	T	T		S				S							S													S	S	S				S				S	S	S						T	T	T	T	T	T		S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
									357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	A	R	G	L	T	E	D	L	V	R	I	S	A	G	I	E	D	V	D	D	L	I	S	D	L	D	I	A	F	K	T
Template Known Secondary structure		S	S	S	S	S			T	T								S	S															S
Template Predicted Secondary structure
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions