Job Description P12998 Confidence 99.97% Date Wed Jan 25 15:20:38 GMT 2012 Rank 166 Aligned Residues 341 % Identity 13% Template d1iaya_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.70

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.											.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	Y	L	N	F	S	S	N	D	Y	L	G	L	S	H	H	P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	.	.	.	.	.	.	.	.	.	.	L	G	Y	S	R	A	L	L	F	I	S	G
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.
Alig confidence													.			.																																												.	.	.	.	.	.	.	.	.	.
Template Conservation													.			.
Template Sequence		N	G	V	I	Q	M	G	L	A	E	N	.	Q	L	.	C	L	D	L	I	E	D	W	I	K	R	N	P	K	G	S	I	C	S	S	F	K	A	I	A	N	F	Q	D	Y	H	G	L	P	E	F	R	K	A	I	A	K	F	M	E	K	T	R	G	G	R	V	R	F	D	P	E	R	V	V	M	A	G	G	A
Template Known Secondary structure		T	S	B				S	S				.		S	.	S												T	T	S	S	T	T												T	T																	T	T	T		S				T	T	S
Template Predicted Secondary structure													.			.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.		.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.								.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																						.										.	.	.	.	.	.	.											.	.	.
Query SS confidence																																						.										.	.	.	.	.	.	.											.	.	.
Query Sequence		F	A	A	N	Q	A	V	I	A	A	M	M	A	K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	A	A	S	L	S	P	.	S	Q	L	R	R	F	A	H	N	.	.	.	.	.	.	.	D	V	T	H	L	A	R	L	L	A	.	.	.	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V
Query Conservation																																						.										.	.	.	.	.	.	.											.	.	.
Alig confidence																																						.										.	.	.	.	.	.	.											.	.	.
Template Conservation
Template Sequence		T	G	A	N	E	T	I	I	F	C	L	A	D	P	G	D	A	F	L	V	P	S	P	Y	Y	P	A	F	N	R	D	L	R	W	R	T	G	V	Q	L	I	P	I	H	C	E	S	S	N	N	F	K	I	T	S	K	A	V	K	E	A	Y	E	N	A	Q	K	S	N	I	K	V	K	G	L	I	L	T	N	P
Template Known Secondary structure															T	T							S	S			T	T					T	T	T	T	T											T	T	T	T	T																	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.										.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure											.	.	.																																											.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.																																											.	.	.	.	.	.	.	.	.
Query Sequence		F	S	M	D	G	D	S	A	P	.	.	.	L	A	E	I	Q	Q	V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	K	P	E	.	.	.	.	.	.	.	.	.	L	L	V	V	T	F	G	K	G	F	G	V	S	G	A	A	V
Query Conservation											.	.	.																																											.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.																																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	N	P	L	G	T	T	L	D	K	D	T	L	K	S	V	L	S	F	T	N	Q	H	N	I	H	L	V	C	D	E	I	Y	A	A	T	V	F	D	T	P	Q	F	V	S	I	A	E	I	L	D	E	Q	E	M	T	Y	C	N	K	D	L	V	H	I	V	Y	S	L	S	K	D	M	G	L	P	G	F	R	V
Template Known Secondary structure			T	T	T																		T	T	T								T	T	G	G	G			S	S	S										T	S	G	G	G	T	T	S		T	T	S							S	T	T	T	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.
Predicted Secondary structure																																									.	.																																				.
Query SS confidence																																									.	.																																				.
Query Sequence		L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	R	H	L	I	Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	.	.	S	D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	P	F	T	L	A	D	S	C	S	A	.	I	Q	P
Query Conservation																																									.	.																																				.
Alig confidence																																									.	.																																				.
Template Conservation
Template Sequence		G	I	I	Y	S	F	N	D	D	V	V	N	C	A	R	K	M	S	S	F	G	L	V	S	T	Q	T	Q	Y	F	L	A	A	M	L	S	D	E	K	F	V	D	N	F	L	R	E	S	A	M	R	L	G	K	R	H	K	H	F	T	N	G	L	E	V	V	G	I	K	C	L	K	N	N	A	G	L	F	C	W
Template Known Secondary structure							S													T	T	S														T	T																														T	T			B				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		323	.	.	.							.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure						.	.	.	.	.	.														.
Query SS confidence						.	.	.	.	.	.														.
Query Sequence		L	I	V	G	.	.	.	.	.	.	D	N	S	R	A	L	Q	L	A	E	K	L	R	.	Q	Q	G	C	W	V	T	A	I	R	P	P	T	V	P	A	G	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G	N
Query Conservation						.	.	.	.	.	.														.
Alig confidence						.	.	.	.	.	.														.													.														.
Template Conservation																																						.														.
Template Sequence		M	D	L	R	P	L	L	R	E	S	T	F	D	S	E	M	S	L	W	R	V	I	I	N	D	V	K	L	N	V	S	P	G	S	S	F	.	E	C	Q	E	P	G	W	F	R	V	C	F	A	.	N	M	D	D	G	T	V	D	I	A	L	A	R	I	R	R	F
Template Known Secondary structure					G	G	G		S	S	S	S														T	S							G	G	G	G	.	T		S	S	S	S							S	.	S	S
Template Predicted Secondary structure																																						.														.
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.		.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions