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Job DescriptionP12998
Confidence99.97%DateWed Jan 25 15:20:38 GMT 2012
Rank166Aligned Residues341
% Identity13%Templated1iaya_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90...... ...100........
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Query Sequence  RQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEW. . . . . . . . . . LGYSRALLFISG
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Template Sequence  NGVIQMGLAEN. QL. CLDLIEDWIKRNPKGSICSSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGA
Template Known Secondary structure  TSB
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   46...50...... .. .60.........70.........80.........90.........100.........110.........120...
 
   109110.........120.........130.........140.... .....150... ......160... ......170.......
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Query Sequence  FAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSP. SQLRRFAHN. . . . . . . DVTHLARLLA. . . SPCPGQQMVVTEGV
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Template Sequence  TGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNP
Template Known Secondary structure 

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TTTTT


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   128.130.........140.........150.........160.........170.........180.........190.........200.......
 
   178.180...... ...190.........200.........210.........220........ .230.........240.....
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Query Sequence  FSMDGDSAP. . . LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPE. . . . . . . . . LLVVTFGKGFGVSGAAV
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Template Sequence  SNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRV
Template Known Secondary structure 
TTT




TTT

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TSGGGTTS
TTSSTTTSS
GGG
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   208.210.........220.........230.........240.........250.........260.........270.........280.......
 
   246...250.........260.........270.........280.... .....290.........300.........310......... 320..
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Query Sequence  LCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIR. . SDEGDARREKLAALITRFRAGVQDLPFTLADSCSA. IQP
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Template Sequence  GIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCW
Template Known Secondary structure  S
TTS


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   288.290.........300.........310.........320.........330.........340.........350.........360.......
 
   323... ...330......... 340.........350.........360.........370.........380...
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Query Sequence  LIVG. . . . . . DNSRALQLAEKLR. QQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN
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Template Sequence  MDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSF. ECQEPGWFRVCFA. NMDDGTVDIALARIRRF
Template Known Secondary structure 
GGG
SSSSTS

GGGG.T
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   368.370.........380.........390.........400... ......410...... ...420.........430...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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