Return to main results Retrieve Phyre Job Id

Job DescriptionP12998
Confidence100.00%DateWed Jan 25 15:20:38 GMT 2012
Rank94Aligned Residues337
% Identity17%Templated1dfoa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RQYLNF. SSNDYLGLSHHPQIIRAWQQGA. EQFGIGSGGSGHVSGY. . . SVVHQALEEELAEWLGYSRA. LLFISGFAAN
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Template Sequence  EEHIELIASENYTS. . . . PRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQAN
Template Known Secondary structure  S

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Query Sequence  QAVIAAMMAKEDRIAADRLSHA. . . SLLEAASLSPSQLRRFAHNDVT. . . . HLARLLASPCPGQQMVVTEGVFSMDGDSA
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Template Sequence  FAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGG. FSAYSGVV
Template Known Secondary structure 

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   103......110.........120.........130.........140.........150.........160.........170... ......180.
 
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Query Sequence  PLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLC. . . SSTVADYLLQFARHL
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Template Sequence  DWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPH. . . AHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFP
Template Known Secondary structure 
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   182.......190.........200.........210......... 220.........230.........240.........250........
 
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Query Sequence  IYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTL. . ADSCSAIQPLIV. GDNSRALQLAEKLR
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Template Sequence  GGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALG
Template Known Secondary structure  TT
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   259260.........270.........280.........290.........300.........310.........320.........330........
 
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Query Sequence  QQGCWVTAIRPPTVPAGT. . . ARLRLTLT. . . . AAHEMQDIDRLLEVLHGN
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Template Sequence  RANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDV
Template Known Secondary structure  TT



TT
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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