Job Description P12998 Confidence 100.00% Date Wed Jan 25 15:20:38 GMT 2012 Rank 104 Aligned Residues 336 % Identity 10% Template d1c7na_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		D	R	Q	Y	L	N	F	S	S	N	D	Y	L	G	L	S	H	H	P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	.	.	.	.	S	R	A	L	L	F	I	S	G	F	A	A	N	Q
Query Conservation																																																																.	.	.	.
Alig confidence														.																										.	.	.	.	.																				.	.	.	.
Template Conservation														.																										.	.	.	.	.
Template Sequence		G	N	E	V	V	P	L	S	V	A	D	M	.	E	F	K	N	P	P	E	L	I	E	G	L	K	K	Y	L	D	E	T	V	L	G	Y	T	G	.	.	.	.	.	P	T	E	E	Y	K	K	T	V	K	K	W	M	K	D	R	H	Q	W	D	I	Q	T	D	W	I	I	N	T	A	G	V	V	P	A	V	F
Template Known Secondary structure			T	T						S	S	S		.	S	S																				S	S			.	.	.	.	.																							G	G	G					S	S
Template Predicted Secondary structure														.																										.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.											.																			.	.
Query SS confidence																																														.	.	.	.	.											.																			.	.
Query Sequence		A	V	I	A	A	M	M	A	K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	A	A	S	L	S	P	S	Q	L	R	R	F	A	H	N	D	V	T	H	.	.	.	.	.	L	A	R	L	L	A	S	P	C	P	.	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	.	.
Query Conservation																																														.	.	.	.	.											.																			.	.
Alig confidence																																														.	.	.	.	.											.																			.	.
Template Conservation
Template Sequence		N	A	V	R	E	F	T	K	P	G	D	G	V	I	I	I	T	P	V	Y	Y	P	F	F	M	A	I	K	N	Q	E	R	K	I	I	E	C	E	L	L	E	K	D	G	Y	Y	T	I	D	F	Q	K	L	E	K	L	S	K	D	K	N	N	K	A	L	L	F	C	S	P	H	N	P	V	G	R	V	W	K	K
Template Known Secondary structure										T	T							S	S			T								T	T	T												T	T														T		T	T								S	S	B	T	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
			186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																									.	.	.																		.	.	.
Query SS confidence		.																																									.	.	.																		.	.	.
Query Sequence		.	P	L	A	E	I	Q	Q	V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	.	.	.	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S	G	.	.	.	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F
Query Conservation		.																																									.	.	.																		.	.	.
Alig confidence		.																																									.	.	.																		.	.	.
Template Conservation
Template Sequence		D	E	L	Q	K	I	K	D	I	V	L	K	S	D	L	M	L	W	S	D	E	I	H	F	D	L	I	M	P	G	Y	E	H	T	V	F	Q	S	I	D	E	Q	L	A	D	K	T	I	T	F	T	A	P	S	K	T	F	N	I	A	G	M	G	M	S	N	I	I	I	K	N	P	D	I	R	E	R	F	T	K
Template Known Secondary structure														S	S								T	T	T	T		B		T	T						G	G	G	S						T	T							S					T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.				.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.
Predicted Secondary structure																																																								.	.	.																.
Query SS confidence																																																								.	.	.																.
Query Sequence		A	R	H	L	I	Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	P	F	T	.	.	.	L	A	D	S	C	S	A	I	Q	P	L	I	V	G	D	.	N	S	R	A	L	Q	L
Query Conservation																																																								.	.	.																.
Alig confidence																							.																																	.	.	.																.
Template Conservation																							.
Template Sequence		S	R	D	A	T	S	G	M	P	F	T	T	L	G	Y	K	A	C	E	I	C	.	Y	K	E	C	G	K	W	L	D	G	C	I	K	V	I	D	K	N	Q	R	I	V	K	D	F	F	E	V	N	H	P	E	I	K	A	P	L	I	E	G	T	Y	L	Q	W	I	D	F	R	A	L	K	M	D	H	K	A	M
Template Known Secondary structure						T	T																.																															T	T	S	B					S	B	S	S							G	G	G
Template Predicted Secondary structure																							.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		335	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		A	E	K	L	R	Q	Q	.	G	C	W	V	T	A	I	R	P	P	T	V	P	A	G	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G	N
Query Conservation									.
Alig confidence									.												.													.	.
Template Conservation																					.													.	.
Template Sequence		E	E	F	M	I	H	K	A	Q	I	F	F	D	E	G	Y	I	F	G	.	D	G	G	I	G	F	E	R	I	N	L	A	.	.	A	P	S	S	V	I	Q	E	S	L	E	R	L	N	K	A
Template Known Secondary structure								T	T							G	G	G	G		.	G	G	G	T	T								.	.	S
Template Predicted Secondary structure																					.													.	.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions