Job Description P12998 Confidence 99.98% Date Wed Jan 25 15:20:38 GMT 2012 Rank 136 Aligned Residues 319 % Identity 16% Template d1c4ka2 SCOP info PLP-dependent transferase-like PLP-dependent transferases Ornithine decarboxylase major domain Resolution 2.70

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																			.	.																																					.
Query SS confidence																			.	.																																					.
Query Sequence		P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	.	.	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	S	R	A	L	L	F	I	S	G	.	F	A	A	N	Q	A	V	I	A	A	M	M	A	K	E	D	R	I	A	A	D	R	L	S
Query Conservation																			.	.																																					.
Alig confidence																			.	.																																					.
Template Conservation
Template Sequence		R	E	F	Y	D	F	F	G	E	T	V	F	R	A	D	L	C	N	A	D	V	A	L	G	D	L	L	I	H	E	G	P	A	V	A	A	E	K	H	A	A	R	V	Y	N	A	D	K	T	Y	F	V	L	G	G	S	S	N	A	N	N	T	V	T	S	A	L	V	S	N	G	D	L	V	L	F	D	R	N	N
Template Known Secondary structure										S					S				T	T	S	G	G	G		B	T	T	T	T	B	T													T	T		S						S	S																T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		133	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.																							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	A	S	L	L	E	.	A	A	S	L	S	P	S	Q	L	R	R	F	A	H	N	D	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	A	R	L	L	A	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	P	L	A	E
Query Conservation								.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																																																						.
Template Sequence		H	K	S	V	Y	N	S	A	L	A	M	A	G	G	R	P	V	Y	L	Q	T	N	R	N	P	Y	G	F	I	G	G	I	Y	D	S	D	F	D	E	K	K	I	R	E	L	A	A	K	V	D	P	E	R	A	K	W	K	R	P	F	R	L	A	V	I	Q	L	G	.	T	Y	D	G	T	I	Y	N	A	H	E
Template Known Secondary structure										T	T	T	T													T	T								G	G	G	S									T	T	T	S	S					T		S			B	S						S	B	.		T	T	S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.							.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																								.																.	.	.	.	.	.															.	.													.	.	.	.	.	.	.	.
Query SS confidence																								.																.	.	.	.	.	.															.	.													.	.	.	.	.	.	.	.
Query Sequence		I	Q	Q	V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	.	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	K	.	.	.	.	.	.	P	E	L	L	V	V	T	F	G	K	G	F	G	V	.	.	S	G	A	A	V	L	C	S	S	T	V	A	.	.	.	.	.	.	.	.
Query Conservation																								.																.	.	.	.	.	.															.	.													.	.	.	.	.	.	.	.
Alig confidence																								.																.	.	.	.	.	.															.	.													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	K	R	I	G	H	L	C	D	Y	I	E	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	R	N	S	S	P	L	L	I	D	D	L	G	P	E	D	P	G	I	I	V	V	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	L	R	Y	C	D
Template Known Secondary structure							G	G	G	B	S							T	T			G	G	G	S	S	G	G	G	G	G	G		T	T	S						T	T	S													S	S			T	T									G	G	G	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	L	L	Q	F	A	R	H	L	I	Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	P	F	T	L	A	D	S	C	S	A	I	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	K	H	F	N	N	S	F	N	L	F	M	S	T	S	P	F	Y	P	M	Y	A	A	L	D	V	N	A	A	M	Q	E	G	E	A	G	R	K	L	W	H	D	L	L	I	T	T	I	E	A	R	K	K	L	I	K	A	G	S	M	F	R	P	F	V	P	P	V	V	N	G	K	K	W	E	D	G	D	T	E
Template Known Secondary structure													S		S	S																	S																									T	T		S	S			S	S		S			T	T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
																																				321	.	.	.	.	.	.												.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	L	I	V	G	D	.	.	.	.	.	.	.	.	.	.	.	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W	V	T	A	I	R	P	P	T	V	P	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.
Template Sequence		D	M	A	N	N	I	D	Y	W	R	F	E	K	G	A	K	W	H	A	Y	E	G	Y	G	D	N	Q	Y	Y	V	D	P	N	K	F	M	L	T	T	P	G	I	N	P	E	T	G	D	Y	E	D	F	G	V	P	A	T	I	V	A	N	Y	L	R	D	H	G	I	I	P	E	K	.	.	.	.	.	.	.	S
Template Known Secondary structure				T	T		G	G	G	G	B			T	T		T	T	T			T	T			T	T						T	T							S	S			T	T	T	T				S	S														T	T				S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.								.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	N	S	I	L	F	L	M	T	P	A	E	T	P	A	K	M	N	N	L	I	T	Q	L	L	Q
Template Known Secondary structure			S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions