Job Description P12998 Confidence 100.00% Date Wed Jan 25 15:20:38 GMT 2012 Rank 102 Aligned Residues 314 % Identity 13% Template c3uwcA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nucleotide-sugar aminotransferase; PDBTitle: structure of an aminotransferase (degt-dnrj-eryc1-strs family) from2 coxiella burnetii in complex with pmp Resolution 1.80 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	S	R	A	L	L	F	I	S	G	F	A	A	N	Q	A	V	I	A	A	M	.	M	A	K	E	D	R	I	A	A	D	R	L	S	H	A
Query Conservation																																																																		.
Alig confidence																					.	.	.	.	.	.	.	.	.																																					.
Template Conservation																					.	.	.	.	.	.	.	.	.
Template Sequence		E	P	Y	L	N	D	L	R	E	F	I	K	T	A	D	F	T	L	G	.	.	.	.	.	.	.	.	.	A	E	L	E	K	F	E	K	R	F	A	A	L	H	N	A	P	H	A	I	G	V	G	T	G	T	D	A	L	A	X	S	F	K	X	L	N	I	G	A	G	D	E	V	I	T	C	A	N	T	F	I
Template Known Secondary structure															T			S	S		.	.	.	.	.	.	.	.	.														T	T		S						S													T	T			T	T							S	S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.										.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	L	E	A	A	S	L	S	P	S	Q	L	R	R	F	A	H	N	D	V	T	H	L	A	R	L	L	A	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	P	L	A	E	I	Q	Q	V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		A	S	V	G	A	I	V	Q	A	G	A	T	P	V	L	V	D	S	E	N	.	G	Y	V	I	D	P	E	K	I	E	A	A	I	T	D	K	T	K	A	I	X	P	V	H	Y	T	G	N	I	A	D	X	P	A	L	A	K	I	A	K	K	H	N	L	H	I	V	E	D	A	C	Q	T	I	L	G	R	I	N
Template Known Secondary structure										T	T								B		T	.	T	S	S	B		G	G	G	T	G	G	G			T	T							B		G	G	G															T	T								T	T		T	T				T
Template Predicted Secondary structure																						.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.									.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.
Query Sequence		Q	G	R	G	S	C	W	L	Q	K	V	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S	G	A	A	V	L	C	S	S	T	V	A	D	Y	L	.	.	.	.	.	.	.	.	L	Q	F	A	R	H	L	I	Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D
Query Conservation																																											.	.	.	.	.	.	.	.
Alig confidence										.	.	.																															.	.	.	.	.	.	.	.
Template Conservation										.	.	.
Template Sequence		D	K	F	V	G	S	W	G	.	.	.	Q	F	A	C	F	S	L	H	P	L	K	N	L	N	V	W	S	D	A	G	V	I	I	T	H	S	D	E	Y	A	E	K	L	R	L	Y	R	N	H	G	L	I	N	R	D	V	C	V	E	Y	G	I	N	C	R	X	D	T	I	Q	A	V	I	A	N	R	L	X	N
Template Known Secondary structure		T			T	T	S	S	S	.	.	.	S							S	S	S	S	S	S			S	S								S												T	B	T	T				T	T			S	S				B		B													G	G
Template Predicted Secondary structure										.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310						.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.																																															.	.	.	.	.
Query SS confidence																										.	.	.	.	.																																															.	.	.	.	.
Query Sequence		E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	P	.	.	.	.	.	F	T	L	A	D	S	C	S	A	I	Q	P	L	I	V	G	D	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W	V	T	A	I	R	P	P	T	V	P	A	G	.	.	.	.	.
Query Conservation																										.	.	.	.	.																																															.	.	.	.	.
Alig confidence																										.	.	.	.	.																																															.	.	.	.	.
Template Conservation
Template Sequence		Q	L	E	T	I	T	E	K	R	R	G	I	A	H	L	Y	D	Q	S	F	V	D	L	S	E	F	I	D	V	P	V	R	R	E	G	V	Y	H	V	F	H	I	Y	V	L	R	V	K	Y	R	D	Q	L	F	Q	Y	L	K	D	N	G	I	E	V	K	I	H	Y	P	I	A	X	H	L	Q	P	A	A	K	S
Template Known Secondary structure		G																			T	G	G	G	T	T	T								T	T						S	S						T	T											T	T	B			B		S		S	S		G	G	G	S	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
																	357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	Y	Q	Q	G	D	F	P	X	A	E	K	H	G	E	A	V	I	T	L	P	A	H	P	Y	L	T	E	E	E	I	N	Y	I	I	K	K	V	R	E
Template Known Secondary structure		G				T	T	S																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions