Job Description P12998 Confidence 99.94% Date Wed Jan 25 15:20:38 GMT 2012 Rank 222 Aligned Residues 303 % Identity 13% Template c3qm2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: 2.25 angstrom crystal structure of phosphoserine aminotransferase2 (serc) from salmonella enterica subsp. enterica serovar typhimurium Resolution 2.25 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																	.																																																.	.	.	.
Query SS confidence																	.																																																.	.	.	.
Query Sequence		Q	Y	L	N	F	S	S	N	D	Y	L	G	L	S	H	.	H	P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	S	R	.	.	.	.	A	L	L	F	I	S	G	F	A	A	N	Q	A
Query Conservation																	.																																																.	.	.	.
Alig confidence								.	.	.	.						.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation								.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	F	N	F	S	.	.	.	.	S	G	P	A	M	L	P	A	E	V	L	K	L	A	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	A	E	E	A	E	Q	D	F	R	D	L	L	N	I	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	G
Template Known Secondary structure								.	.	.	.	S	S	S												T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T			T	T								S		T	T
Template Predicted Secondary structure								.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.					.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.														.
Query SS confidence																																						.	.	.	.	.														.
Query Sequence		V	I	A	A	M	M	A	K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	A	A	S	L	S	P	S	Q	L	R	R	F	.	.	.	.	.	A	H	N	D	V	T	H	L	A	R	L	L	A	.	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	P	L	A
Query Conservation																																						.	.	.	.	.														.
Alig confidence																																						.	.	.	.	.														.																								.	.
Template Conservation																																																																																.	.
Template Sequence		V	P	L	N	L	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	A	P	Q	I	I	D	A	K	I	T	V	D	G	K	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	L	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	.	.
Template Known Secondary structure								T	T									S	S											T	T	T	S												T	T							G	G	G					T	T		S						S			T	T	T	T					.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																																								.																							.	.	.
Query SS confidence																																																								.																							.	.	.
Query Sequence		E	I	Q	Q	V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S	G	.	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	R	H	L	I	Y	.	.	.
Query Conservation																																																								.																							.	.	.
Alig confidence									.	.																					.	.	.	.	.	.	.	.																		.																							.	.	.
Template Conservation									.	.																					.	.	.	.	.	.	.	.
Template Sequence		E	T	P	D	F	G	P	.	.	E	V	V	V	T	A	D	F	S	S	T	I	L	S	A	P	L	D	V	S	.	.	.	.	.	.	.	.	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	L	T	L	V	I	V	R	E	D	L	L	G	K	A	H	E	S	C	P	S	I	L	D	Y	T	V
Template Known Secondary structure								T	.	.	T								T	T	T	T	T	S	S				G	G	.	.	.	.	.	.	.	.	G		S						T	T	T	T	T			T	T								G	G	G		S				T	T	S		G	G	G
Template Predicted Secondary structure									.	.																					.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.									.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.						.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.																																	.	.	.	.	.
Query SS confidence																								.																																	.	.	.	.	.
Query Sequence		S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	.	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	P	F	T	L	A	D	S	C	S	.	.	.	.	.	A	I	Q	P	L	I	V	G	D	N	S	R	A	L	Q	L	A	E	K	L
Query Conservation																								.																																	.	.	.	.	.
Alig confidence																								.																																	.	.	.	.	.
Template Conservation
Template Sequence		L	N	D	N	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	Q	G	G	V	A	A	M	H	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	Q	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	N	T	L	D	K	V	F	L	E	E	S
Template Known Secondary structure								S																T																						T		S	S					B		G	G	G	B		S	S							S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	Q	G	C	W	V	T	A	I	R	P	P	T	V	P	A	G	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G
Query Conservation
Alig confidence																.	.	.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		F	A	A	G	L	H	A	L	K	G	H	R	V	V	.	.	.	.	.	G	G	M	R	A	S	I	Y	N	A	M	P	I	E	G	V	K	A	L	T	D	F	M	I	D
Template Known Secondary structure				T	T					B			T	T	T	.	.	.	.	.		S							T	T	S
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.						.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions