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Job DescriptionP12998
Confidence99.97%DateWed Jan 25 15:20:38 GMT 2012
Rank159Aligned Residues332
% Identity12%Templatec3op7A_
PDB info PDB header:transferaseChain: A: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of a plp-dependent aminotransferase (zp_03625122.1)2 from streptococcus suis 89-1591 at 1.70 a resolution
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90......... 100.........110
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Query Sequence  LVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGY. . . SRALLFISGFA
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Template Sequence  YDIAGVSISSLTLEELFALS. . GTNPEDFYKKLQG. . . . . . . TKLNYGWIEGSPAFKKSVSQLYTGVKPEQILQTNGATG
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   21........30.........40 .........50... ......60.........70.........80.........90.
 
   111........120.........130.........140.........150 .........160.........170.........180......
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Query Sequence  ANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRF. . . . AHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAP
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Template Sequence  ANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKXICINNANNPTGAVXD
Template Known Secondary structure 

TT
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TTT
GGGTT


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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   187..190.........200.........210.........220.........230.........240.........250.........260...
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Query Sequence  . . . LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLI
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Template Sequence  RTYLEELVEIASEVGAYILSDEVY. RSFSELDVPSIIEVYDKGIAVNSLSTYSLPGIRIGWVAANHQVTDILRDYR. . . D
Template Known Secondary structure  TTT


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   172.......180.........190..... ....200.........210.........220.........230.........240...... .
 
   264.....270.........280.........290.........300.........310.. .......320.........330....... ..340
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Query Sequence  YSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFT. . LADSCSAIQPLIVGDNSRALQLAEK. LRQ
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Template Sequence  YTXICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDXPXEDFCLQLLQE
Template Known Secondary structure  GTTS


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TT


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   249250.........260.........270.........280.........290.........300.........310.........320........
 
   341........350.........360.........370.........380...
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Query Sequence  QGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN
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Template Sequence  HGVLLVPGNRF. . . ERDGYVRLGFA. . CEQETLIKGLEKLSQF
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GGGG...T
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   329330......... 340.........350 .........360......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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