Job Description P12998 Confidence 100.00% Date Wed Jan 25 15:20:38 GMT 2012 Rank 78 Aligned Residues 318 % Identity 16% Template c3ly1C_ PDB info PDB header:transferase Chain: C: PDB Molecule:putative histidinol-phosphate aminotransferase; PDBTitle: crystal structure of putative histidinol-phosphate aminotransferase2 (yp_050345.1) from erwinia carotovora atroseptica scri1043 at 1.80 a3 resolution Resolution 1.80 Å

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		39	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure											.																																																					.	.
Query SS confidence											.																																																					.	.
Query Sequence		R	Q	Y	L	N	F	S	S	N	.	D	Y	L	G	L	S	H	H	P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	.	.	S	R	A	L	L	F	I	S	G	F	A	A	N	Q	A	V
Query Conservation											.																																																					.	.
Alig confidence											.					.	.																.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																.	.																.	.	.	.	.	.	.	.	.
Template Sequence		D	N	P	I	R	I	N	F	N	E	N	P	L	G	.	.	X	S	P	K	A	Q	A	A	A	R	D	A	V	V	K	.	.	.	.	.	.	.	.	.	A	N	R	Y	A	K	N	E	I	L	X	L	G	N	K	L	A	A	H	H	Q	V	E	A	P	S	I	L	L	T	A	G	S	S	E	G	I	R	A	A
Template Known Secondary structure		S	S					S	S				S	S		.	.													G	G	G	.	.	.	.	.	.	.	.	.	T	T	S																	T	T	S		G	G	G					S
Template Predicted Secondary structure																.	.																.	.	.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.										.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																									.	.	.	.
Query SS confidence																																									.	.	.	.
Query Sequence		I	A	A	M	M	A	K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	A	A	S	L	S	P	S	Q	L	R	R	F	A	H	N	D	.	.	.	.	V	T	H	L	A	R	L	L	A	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	P	L	A	E	I	Q
Query Conservation																																									.	.	.	.
Alig confidence																																									.	.	.	.
Template Conservation
Template Sequence		I	E	A	Y	A	S	L	E	A	Q	L	V	I	P	E	L	T	Y	G	D	G	E	H	F	A	K	I	A	G	X	K	V	T	K	V	K	X	L	D	N	W	A	F	D	I	E	G	L	K	A	A	V	A	A	Y	S	G	P	S	I	V	Y	L	V	N	P	N	N	P	T	G	T	I	T	P	A	D	V	I	E
Template Known Secondary structure								T	T							S	S	S		T									T	T										T	T	S													T			S								S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		192	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure						.	.																											.	.																						.	.	.
Query SS confidence						.	.																											.	.																						.	.	.
Query Sequence		Q	V	T	Q	.	.	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	.	.	L	Q	K	V	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S	G	.	.	.	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	R	H	L	I	Y
Query Conservation						.	.																											.	.																						.	.	.
Alig confidence						.	.																											.	.																						.	.	.																.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.
Template Sequence		P	W	I	A	S	K	P	A	N	T	X	F	I	V	D	E	A	Y	A	E	F	V	N	D	P	R	F	R	S	I	S	P	X	I	T	Q	G	A	E	N	I	I	L	L	K	T	F	S	K	I	H	A	X	A	G	X	R	V	G	Y	A	V	A	H	P	T	V	I	A	L	X	G	R	.	.	.	.	.	.	Y
Template Known Secondary structure						T			T	T								T	T	G	G	G				T	T				S						T	T		S	S							S	S	S	T	T			G	G	G																	T	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																											.	.	.	.	.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.							.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	P	F	T	L	A	D	S	C	S	A	I	Q	P	L	I	V	G	D	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W
Query Conservation
Alig confidence																																																																	.	.
Template Conservation																																																																	.	.
Template Sequence		V	A	G	E	K	I	N	F	S	G	V	D	A	A	L	A	S	X	N	D	S	A	F	I	T	Y	S	K	K	S	N	D	V	S	R	Q	I	L	L	K	A	L	E	D	L	K	L	P	Y	L	P	S	E	G	N	F	V	F	H	Q	L	V	V	.	.	P	L	K	D	Y	Q	T	H	X	A	D	A	G	V	L
Template Known Secondary structure		T	T	S	S																																										T			B					S	S							S	S	.	.												T	T
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.			.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	I	R	P	P	T	V	P	A	G	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G
Query Conservation
Alig confidence								.	.	.	.												.	.	.
Template Conservation								.	.	.	.												.	.	.
Template Sequence		I	G	R	A	F	P	.	.	.	.	P	A	D	N	W	C	R	I	S	L	G	.	.	.	T	P	Q	E	X	Q	W	V	A	D	T	X	R	E
Template Known Secondary structure							T	.	.	.	.	T		T	T								.	.	.
Template Predicted Secondary structure								.	.	.	.												.	.	.
Template SS confidence
		357	.	.	360	.	.					.	.	.	.	.	.	.	370	.	.	.				.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions