Job Description P12998 Confidence 100.00% Date Wed Jan 25 15:20:38 GMT 2012 Rank 97 Aligned Residues 330 % Identity 12% Template c3lwsF_ PDB info PDB header:lyase Chain: F: PDB Molecule:aromatic amino acid beta-eliminating PDBTitle: crystal structure of putative aromatic amino acid beta-2 eliminating lyase/threonine aldolase. (yp_001813866.1) from3 exiguobacterium sp. 255-15 at 2.00 a resolution Resolution 2.00 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		F	S	S	N	D	Y	L	G	L	S	H	H	P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	S	R	A	L	L	F	I	S	G	F	A	A	N	Q	A	V	I	A	A	M	M	.	.	A
Query Conservation																																																																															.	.
Alig confidence																											.	.																																																			.	.
Template Conservation																											.	.
Template Sequence		F	Q	Q	T	T	G	Q	I	S	G	H	G	K	R	N	V	G	V	L	K	T	A	F	A	A	.	.	V	A	D	E	X	A	S	D	Q	Y	G	T	G	A	I	I	E	P	F	E	Q	K	F	A	D	V	L	G	X	D	D	A	V	F	F	P	S	G	T	X	A	Q	Q	V	A	L	R	I	W	S	D	E	T
Template Known Secondary structure				T		S			S	S	B	S	S												T	T	.	.	S		T	T						T	T			T	T												T	T		S						S
Template Predicted Secondary structure																											.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																			.	.	.																																															.	.	.
Query SS confidence																			.	.	.																																															.	.	.
Query Sequence		K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	.	.	.	A	A	S	L	S	P	S	Q	L	R	R	F	A	H	N	D	V	T	H	L	A	R	L	L	A	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	.	.	.	A	P	L	A	E	I	Q	Q	V	T	Q
Query Conservation																			.	.	.																																															.	.	.
Alig confidence																			.	.	.																																															.	.	.
Template Conservation
Template Sequence		D	N	R	T	V	A	Y	H	P	L	C	H	L	E	I	H	E	Q	D	G	L	K	E	L	H	P	I	E	T	I	L	V	G	A	A	D	R	L	X	T	L	D	E	I	K	A	L	P	D	I	A	C	L	L	L	E	L	P	Q	R	E	I	G	G	V	A	P	A	F	S	E	L	E	T	I	S	R	Y	C	R
Template Known Secondary structure		T								T	T						S	S	T	T						S	S							S		T	T	S												S		S						S	S	B	G	G	G	T	S	B
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S	G	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	R	H	L	I	Y	S	T	S	M	P	P	A	Q	A	Q	A
Query Conservation
Alig confidence																															.																																		.	.	.	.	.
Template Conservation																															.																																		.	.	.	.	.
Template Sequence		E	R	G	I	R	L	H	L	D	G	A	R	L	F	E	X	L	P	Y	Y	E	K	T	A	A	E	I	A	G	.	L	F	D	S	I	Y	I	S	F	Y	G	L	G	G	I	A	G	A	I	L	A	G	P	A	A	F	C	Q	T	A	R	I	W	.	.	.	.	.	K	R	R	Y	G	G	D	L	I	S	L	Y
Template Known Secondary structure				T								T	T									T								T	.	T		S												S	S																		.	.	.	.	.					T				S
Template Predicted Secondary structure																															.																																		.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.						.	.	230	.	.	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.						.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		L	R	A	S	L	A	V	I	R	S	D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	P	F	T	L	.	.	.	.	.	A	D	S	C	S	A	I	Q	P	L	I	V	G	D	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W	V	T	A	I	R	P
Query Conservation																																								.	.	.	.	.
Alig confidence																																								.	.	.	.	.																																			.	.
Template Conservation																																																																															.	.
Template Sequence		P	Y	I	V	S	A	D	Y	Y	Y	E	L	R	K	D	R	X	G	Q	Y	Y	E	Q	A	K	Q	L	A	E	Q	F	N	A	L	P	G	V	H	T	T	P	E	V	P	V	S	N	X	F	H	L	H	F	D	G	Q	A	A	D	I	S	P	K	L	E	Q	V	Q	E	E	T	G	L	G	F	V	G	.	.	Y
Template Known Secondary structure															T	T																			S	T	T					S	S	S		S	S	S								S																				S		S	.	.
Template Predicted Secondary structure																																																																															.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.			.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.				.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		P	T	V	P	A	G	T	A	R	L	R	L	T	L	T	.	.	.	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G	N
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		L	V	D	K	D	G	Y	C	S	T	E	I	S	V	G	D	A	Y	G	E	L	D	Q	Q	T	R	D	A	G	F	A	R	L	R	Q	A
Template Known Secondary structure						S	S								B						T	S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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