Job Description P12998 Confidence 100.00% Date Wed Jan 25 15:20:38 GMT 2012 Rank 74 Aligned Residues 321 % Identity 11% Template c3getA_ PDB info PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: crystal structure of putative histidinol-phosphate aminotransferase2 (np_281508.1) from campylobacter jejuni at 2.01 a resolution Resolution 2.01 Å

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		37	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure													.																																																					.	.
Query SS confidence													.																																																					.	.
Query Sequence		D	D	R	Q	Y	L	N	F	S	S	N	.	D	Y	L	G	L	S	H	H	P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	.	.	S	R	A	L	L	F	I	S	G	F	A	A	N	Q
Query Conservation													.																																																					.	.
Alig confidence													.					.	.																.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																		.	.																.	.	.	.	.	.	.	.	.
Template Sequence		G	V	K	E	V	I	K	L	A	S	N	E	N	P	F	G	.	.	T	P	P	K	A	I	E	C	L	R	Q	N	A	N	K	.	.	.	.	.	.	.	.	.	A	H	L	Y	P	D	D	S	X	I	E	L	K	S	T	L	A	Q	K	Y	K	V	Q	N	E	N	I	I	I	G	A	G	S	D	Q	V	I	E
Template Known Secondary structure		T		S						S	S				T	T		.	.	S												G	G	G	.	.	.	.	.	.	.	.	.	T	T	S				T	T													T			G	G	G					S	S
Template Predicted Secondary structure																		.	.																.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.										.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		A	V	I	A	A	M	M	A	K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	A	A	S	L	S	P	S	Q	L	R	R	F	A	H	N	D	.	.	V	T	H	L	A	R	L	L	A	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	P	L	A	E	I	Q
Query Conservation																																											.	.
Alig confidence																																											.	.
Template Conservation
Template Sequence		F	A	I	H	S	K	L	N	S	K	N	A	F	L	Q	A	G	V	T	F	A	X	Y	E	I	Y	A	K	Q	C	G	A	K	C	Y	K	T	Q	S	I	T	H	N	L	D	E	F	K	K	L	Y	E	T	H	K	D	E	I	K	L	I	F	L	C	L	P	N	N	P	L	G	E	C	L	D	A	S	E	A	T
Template Known Secondary structure										T	T							S	S			T										T							S	S	S	S													T	T	T	T								S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		192	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure						.	.																															.	.	.	.																	.	.
Query SS confidence						.	.																															.	.	.	.																	.	.
Query Sequence		Q	V	T	Q	.	.	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	.	.	.	.	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S	.	.	G	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	R	H	L	I
Query Conservation						.	.																															.	.	.	.																	.	.
Alig confidence						.	.																															.	.	.	.																	.	.																			.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		E	F	I	K	G	V	N	E	D	C	L	V	V	I	D	A	A	Y	N	E	F	A	S	F	K	D	S	K	K	H	L	E	P	C	E	L	I	K	E	F	D	N	V	L	Y	L	G	T	F	S	L	Y	G	L	G	G	L	R	I	G	Y	G	I	A	N	A	N	I	I	S	A	F	Y	K	L	R	.	.	.	.
Template Known Secondary structure						T	S		T	T	S							T	T									G	G	G												T	T											S		T	T	T																			S	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	P	F	T	L	A	D	S	C	S	A	I	Q	P	L	I	V	G	D	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C
Query Conservation
Alig confidence		.	.																																																														.
Template Conservation		.	.																																																														.
Template Sequence		.	.	A	P	F	N	V	S	N	L	A	L	K	A	A	V	A	A	X	D	D	D	E	F	T	E	K	T	L	E	N	N	F	S	Q	X	E	L	Y	K	E	F	A	K	K	H	N	I	K	I	I	D	S	Y	T	N	F	I	T	Y	F	F	D	.	E	K	N	S	T	D	L	S	E	K	L	L	K	K	G	I
Template Known Secondary structure		.	.		T	T		S													T																										T	T							S	S	S							S	.	S	S											T	T	T
Template Predicted Secondary structure		.	.																																																														.
Template SS confidence
				253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	T	A	I	R	P	P	T	V	P	A	G	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G
Query Conservation
Alig confidence										.	.	.	.											.	.	.
Template Conservation										.	.	.	.											.	.	.
Template Sequence		I	I	R	N	L	K	S	Y	.	.	.	.	G	L	N	A	I	R	I	T	I	G	.	.	.	T	S	Y	E	N	E	K	F	F	T	E	F	D	K
Template Known Secondary structure							G	G	G	.	.	.	.	T		S								.	.	.
Template Predicted Secondary structure										.	.	.	.											.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.					.	.	340	.	.	.	.	.	.	.				.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions