Job Description P12998 Confidence 99.94% Date Wed Jan 25 15:20:38 GMT 2012 Rank 220 Aligned Residues 301 % Identity 13% Template c3fd0B_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative cystathionine beta-lyase involved in aluminum PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_470671.1) from listeria innocua at 2.12 a3 resolution Resolution 2.12 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.
Predicted Secondary structure																																																		.	.	.																									.
Query SS confidence																																																		.	.	.																									.
Query Sequence		Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	S	R	A	L	L	.	.	.	F	I	S	G	F	A	A	N	Q	A	V	I	A	A	M	M	A	K	E	D	R	I	A	A	.	D	R	L	S
Query Conservation																																																		.	.	.																									.
Alig confidence																												.																						.	.	.																									.
Template Conservation																												.
Template Sequence		K	V	L	D	A	F	Q	E	N	K	V	S	D	F	H	F	N	P	S	T	G	Y	G	Y	D	D	.	E	G	R	D	T	L	E	R	V	Y	A	S	V	F	K	T	E	A	A	L	V	R	P	Q	I	I	S	G	T	H	A	I	S	T	V	L	F	G	I	L	R	P	G	D	E	L	L	Y	I	T	G	E	P
Template Known Secondary structure										T	T			G	G	G	G					T	T		T	T		.															T		S						T	T	S		S															T	T							S	S	S
Template Predicted Secondary structure																												.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		133	.	.	.	.	.	.	140	.	.	.											.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.														.	.																						.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.														.	.																						.	.	.	.
Query Sequence		H	A	S	L	L	E	A	A	S	L	S	.	.	.	.	.	.	.	.	.	.	P	S	Q	L	R	R	F	A	H	N	D	V	T	.	.	H	L	A	R	L	L	A	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	.	.	.	.	F	S	M	D	G	D	S	A	P	L	A	E	I	Q	Q	V	T	Q	Q
Query Conservation													.	.	.	.	.	.	.	.	.	.														.	.																						.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.														.	.																						.	.	.	.
Template Conservation
Template Sequence		Y	D	T	L	E	E	I	V	G	I	R	S	E	G	Q	G	S	L	K	D	F	Q	I	G	Y	D	A	V	P	L	L	P	N	G	E	I	D	Y	P	A	V	S	K	K	I	S	A	N	T	K	X	I	G	I	Q	R	S	R	G	Y	A	D	R	P	S	F	T	I	E	K	I	K	E	X	V	T	F	V	K	N
Template Known Secondary structure			T	T						T	S	S		S	S	S			T	G	G	G	T										T	T	S	S												T	T									S		T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		197	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																																										.	.	.																	.	.
Query SS confidence				.	.																																										.	.	.																	.	.
Query Sequence		H	N	.	.	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	K	P	E	L	L	V	V	T	F	G	K	G	F	G	.	.	.	V	S	G	A	A	V	L	C	S	S	T	V	A	D	Y	L	.	.	L	Q	F	A	R	H	L	I	Y	S	T	S	M	P
Query Conservation				.	.																																										.	.	.																	.	.
Alig confidence				.	.																.	.	.	.	.	.																					.	.	.																	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		I	N	P	N	I	I	V	F	V	D	N	C	Y	G	E	F	V	E	R	.	.	.	.	.	.	I	E	P	T	E	V	G	A	D	I	I	A	G	S	L	I	N	P	G	G	G	L	A	K	T	G	G	Y	I	A	G	R	N	T	L	V	D	L	C	G	Y	R	L	T	T	P	G	I	G	R	E	A	G	A	S
Template Known Secondary structure				T	T	S							T	T	T	T	T	T	S	S	.	.	.	.	.	.			G	G	G	T	T		S									T	T	T	T	T			S																			S		T	T	T	G	G	G
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.						320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.
Query Sequence		P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	P	F	T	L	A	D	S	C	S	A	.	.	.	.	.	I	Q	P	L	I	V	G	D	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W
Query Conservation																																																				.	.	.	.	.
Alig confidence																	.	.	.	.	.																															.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		L	Y	S	L	L	E	X	Y	Q	G	F	F	L	A	P	.	.	.	.	.	H	V	T	A	Q	A	I	K	G	A	R	F	T	A	A	X	L	A	E	F	G	V	E	A	D	P	L	W	D	A	K	R	T	D	L	I	Q	S	V	S	F	H	S	K	D	K	X	I	A	F	A	Q	A	I	Q	A	A	S	P	V
Template Known Secondary structure		T	T														.	.	.	.	.																				T	T					S		T	T	S			S	S	S							S															T	S	S	S
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280						.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		345	.	.	.	.	350		.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.							.
Query SS confidence								.							.
Query Sequence		V	T	A	I	R	P	.	P	T	V	P	A	G	.	T	A	R	L	R	L	T	L	T	A	A	H	E
Query Conservation								.							.
Alig confidence								.							.
Template Conservation
Template Sequence		N	A	H	V	L	P	I	G	A	Y	X	P	G	Y	E	D	D	V	I	X	A	A	G	T	F	I	Q
Template Known Secondary structure		S	T	T	S					B			T	T		S	S									S	S	T
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions