Job Description P12998 Confidence 100.00% Date Wed Jan 25 15:20:38 GMT 2012 Rank 90 Aligned Residues 327 % Identity 14% Template c3f9tB_ PDB info PDB header:lyase Chain: B: PDB Molecule:l-tyrosine decarboxylase mfna; PDBTitle: crystal structure of l-tyrosine decarboxylase mfna (ec 4.1.1.25)2 (np_247014.1) from methanococcus jannaschii at 2.11 a resolution Resolution 2.11 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure															.	.	.																																																	.	.
Query SS confidence															.	.	.																																																	.	.
Query Sequence		L	N	F	S	S	N	D	Y	L	G	L	S	H	.	.	.	H	P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	S	R	A	.	.	L	L	F	I	S	G	F	A	A	N	Q	A	V	I
Query Conservation															.	.	.																																																	.	.
Alig confidence															.	.	.																								.	.	.																							.	.
Template Conservation																																									.	.	.
Template Sequence		L	K	Y	E	D	G	N	I	F	G	S	X	C	S	N	V	L	P	I	T	R	K	I	V	D	I	F	L	E	T	N	L	G	D	P	G	L	F	K	.	.	.	G	T	K	L	L	E	E	K	A	V	A	L	L	G	S	L	L	N	N	K	D	A	Y	G	H	I	V	S	G	G	T	E	A	N	L	X	A	L
Template Known Secondary structure				G	G	G	S		B		S		S						T										T	T			T	T	S	G	G	G			.	.	.																	T	T		T	T							S
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		117	.	.	120	.														.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Query Sequence		A	A	M	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	A	A	S	L	S	P	S	Q	L	R	R	F	A	H	N	.	.	.	.	.	D	V	T	H	L	A	R	L	L	A	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.													.	.
Template Conservation																																																																					.	.
Template Sequence		R	C	I	K	N	I	W	R	E	K	R	R	K	G	L	S	K	N	E	H	P	K	I	I	V	P	I	T	A	H	F	S	F	E	K	G	R	E	X	X	D	L	E	Y	I	Y	A	P	I	K	E	D	Y	T	I	D	E	K	F	V	K	D	A	V	E	D	Y	.	.	D	V	D	G	I	I	G	I	A	G	T
Template Known Secondary structure														T	T					S	S							T	T			T										T								B		T	T	S	S	B												S	.	.									B	S
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.								.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.																.	.
Query SS confidence																																																	.	.	.	.	.	.	.																.	.
Query Sequence		S	M	D	G	D	S	A	P	L	A	E	I	Q	Q	V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	.	.	.	.	.	.	.	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	.	.	S	G	A	A	V	L	C	S	S
Query Conservation																																																	.	.	.	.	.	.	.																.	.
Alig confidence																																																	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		T	E	L	G	T	I	D	N	I	E	E	L	S	K	I	A	K	E	N	N	I	Y	I	H	V	D	A	A	F	G	G	L	V	I	P	F	L	D	D	K	Y	K	K	K	G	V	N	Y	K	F	D	F	S	L	G	V	D	S	I	T	I	D	P	H	K	X	G	H	C	P	I	P	S	G	G	I	L	F	K	D
Template Known Secondary structure		T	T	T			B														T								T	T	G	G	G	T	G	G	G			G	G	G			T	T						S	G	G	G	T		S						T	T	T	T	T				S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.								.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.
Predicted Secondary structure																				.	.	.	.	.	.	.																																														.
Query SS confidence																				.	.	.	.	.	.	.																																														.
Query Sequence		T	V	A	D	Y	L	L	Q	F	A	R	H	L	I	Y	S	T	S	.	.	.	.	.	.	.	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	P	F	T	.	L	A	D	S	C	S	A	I	Q
Query Conservation																				.	.	.	.	.	.	.																																														.
Alig confidence																				.	.	.	.	.	.	.																																														.
Template Conservation
Template Sequence		I	G	Y	K	R	Y	L	D	V	D	A	P	Y	L	T	E	T	R	Q	A	T	I	L	G	T	R	V	G	F	G	G	A	C	T	Y	A	V	L	R	Y	L	G	R	E	G	Q	R	K	I	V	N	E	C	X	E	N	T	L	Y	L	Y	K	K	L	K	E	N	N	F	K	P	V	I	E	P	I	L	N	I	V
Template Known Secondary structure		G	G	G	G	G	G	T					T	T	S	S	S	S				S	S		S	S			S																																							T	T			B	S	S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	I	V	G	D	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W	V	T	A	I	R	P	P	T	V	P	A	G	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G
Query Conservation
Alig confidence								.	.	.																						.	.	.	.	.	.
Template Conservation								.	.	.																						.	.	.	.	.	.
Template Sequence		A	I	E	D	E	D	.	.	.	Y	K	E	V	C	K	K	L	R	D	R	G	I	Y	V	S	V	C	N	C	V	.	.	.	.	.	.	K	A	L	R	I	V	V	X	P	H	I	K	R	E	H	I	D	N	F	I	E	I	L	N	S
Template Known Secondary structure						T	T	.	.	.											T	T		B					S	S	S	.	.	.	.	.	.	S								T	T
Template Predicted Secondary structure								.	.	.																						.	.	.	.	.	.
Template SS confidence
		341	.	.	.	.	.				.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.							.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions