Job Description P12998 Confidence 99.96% Date Wed Jan 25 15:20:38 GMT 2012 Rank 198 Aligned Residues 302 % Identity 11% Template c3ez1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase mocr family; PDBTitle: crystal structure of putative aminotransferase (mocr family)2 (yp_604413.1) from deinococcus geothermalis dsm 11300 at 2.60 a3 resolution Resolution 2.60 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.														.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																						.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	Y	S	V	V	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	.	.	S	R	A	L	L	F	I	S	G	F	A	A	N	Q	A	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	M	M	A	K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	A	A	S	L	S	P
Query Conservation																						.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	G	V	A	G	L	P	S	A	R	A	L	F	A	G	Y	L	D	V	K	A	E	N	V	L	V	W	N	N	S	S	L	E	L	Q	G	L	V	L	T	F	A	L	L	H	G	V	R	G	S	T	G	P	W	L	S	Q	T	P	K	X	I	V	T	V	P	G	Y	D	R	H	F	L	L	L	Q	T	L	G
Template Known Secondary structure			S		T	T													T	T	S		G	G	G					S	S																T			T	T		S	S		G	G	G	G									S													T
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		145	.	.	.	.	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																																									.	.	.	.
Query SS confidence											.	.	.	.																																									.	.	.	.
Query Sequence		S	Q	L	R	R	F	A	H	N	.	.	.	.	D	V	T	H	L	A	R	L	L	A	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	P	L	A	E	I	Q	Q	V	.	.	.	.	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G
Query Conservation											.	.	.	.																																									.	.	.	.
Alig confidence											.	.	.	.																																									.	.	.	.
Template Conservation
Template Sequence		F	E	L	L	T	V	D	X	Q	S	D	G	P	D	V	D	A	V	E	R	L	A	G	T	D	P	S	V	K	G	I	L	F	V	P	T	Y	S	N	P	G	G	E	T	I	S	L	E	K	A	R	R	L	A	G	L	Q	A	A	A	P	D	F	T	I	F	A	D	D	A	Y	R	V	H	H	L	V	E	E	D
Template Known Secondary structure											T	T													S		T	T								S	S	S		T	T	T														T				S	S	T	T								T	T	S	S		B			S	S	S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		217	.	.	220	.	.	.	.	.									.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.																	.	.																																								.
Query SS confidence											.	.	.	.	.	.	.	.																	.	.																																								.
Query Sequence		R	G	S	C	W	L	Q	K	V	.	.	.	.	.	.	.	.	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S	.	.	G	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	R	H	L	I	Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	.	A	V	I	R	S
Query Conservation											.	.	.	.	.	.	.	.																	.	.																																								.
Alig confidence											.	.	.	.	.	.	.	.																	.	.																																								.
Template Conservation
Template Sequence		R	A	E	P	V	N	F	V	V	L	A	R	D	A	G	Y	P	D	R	A	F	V	F	A	S	T	S	K	I	T	F	A	G	A	G	L	G	F	V	A	S	S	E	D	N	I	R	W	L	S	K	Y	L	G	A	Q	S	I	G	P	N	K	V	E	Q	A	R	H	V	K	F	L	T	E	Y	P	G	G	L	E
Template Known Secondary structure																T		T	T	S							S	T	T	T	S		S	S	S	S																					S		S																	S	T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.								.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.				.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.																																													.	.	.
Query SS confidence																									.	.	.	.	.	.	.																																													.	.	.
Query Sequence		D	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	.	.	.	.	.	.	.	L	P	F	T	L	A	D	S	C	S	A	I	Q	P	L	I	V	G	D	N	S	R	A	L	Q	L	A	E	K	L	R	Q	Q	G	C	W	V	T	A	I	R	P	P	T	.	.	.	V	P	A
Query Conservation																									.	.	.	.	.	.	.																																													.	.	.
Alig confidence																									.	.	.	.	.	.	.																					.																								.	.	.
Template Conservation																																																				.
Template Sequence		G	L	X	R	D	H	A	A	I	I	A	P	K	F	R	A	V	D	E	V	L	R	A	E	L	G	E	G	G	E	Y	A	T	W	T	L	P	K	G	G	Y	F	I	S	L	D	T	A	E	P	.	V	A	D	R	V	V	K	L	A	E	A	A	G	V	S	L	T	P	A	G	A	T	Y	P	A	G	Q	D	P
Template Known Secondary structure																											T	T	T	T	S	S							S	B	S	S							S	S	S	.												T	T						T	T	T	T	S	S	T	T			S
Template Predicted Secondary structure																																																				.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G	N
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		H	N	R	N	L	R	L	A	P	T	R	P	.	P	V	E	E	V	R	T	A	X	Q	V	V	A	A	C
Template Known Secondary structure		S	S								S	S	S	.
Template Predicted Secondary structure														.
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions