Job Description P12998 Confidence 99.94% Date Wed Jan 25 15:20:38 GMT 2012 Rank 224 Aligned Residues 317 % Identity 13% Template c3e77A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: human phosphoserine aminotransferase in complex with plp Resolution 2.50 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.		.	.	110	.	.	.
Predicted Secondary structure																																														.	.	.	.																.	.	.								.
Query SS confidence																																														.	.	.	.																.	.	.								.
Query Sequence		L	N	F	S	S	N	D	Y	L	G	L	S	H	H	P	Q	I	I	R	A	W	Q	Q	G	A	E	Q	F	G	I	G	S	G	G	S	G	H	V	S	G	Y	S	V	V	.	.	.	.	H	Q	A	L	E	E	E	L	A	E	W	L	G	Y	S	.	.	.	R	A	L	L	F	I	S	.	G	F	A	A	N	Q
Query Conservation																																														.	.	.	.																.	.	.								.
Alig confidence										.	.	.	.	.	.																															.	.	.	.																.	.	.								.
Template Conservation										.	.	.	.	.	.
Template Sequence		L	Y	F	Q	S	M	L	P	.	.	.	.	.	.	H	S	V	L	L	E	I	Q	K	E	L	L	D	Y	K	G	V	G	I	S	V	L	E	M	S	H	R	S	S	D	F	A	K	I	I	N	N	T	E	N	L	V	R	E	L	L	A	V	P	D	N	Y	K	V	I	F	L	Q	G	G	G	C	G	Q	F	S
Template Known Secondary structure					S					.	.	.	.	.	.										T	S	S	S	G	G	G	S	S	S		T	T	T			T	T	S																			T			T	T							S	S
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.							.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		114	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure										.	.																																		.	.	.	.
Query SS confidence										.	.																																		.	.	.	.
Query Sequence		A	V	I	A	A	M	M	A	.	.	K	E	D	R	I	A	A	D	R	L	S	H	A	S	L	L	E	A	A	S	L	S	P	S	Q	L	R	R	F	A	H	N	D	.	.	.	.	V	T	H	L	A	R	L	L	A	S	P	C	P	G	Q	Q	M	V	V	T	E	G	V	F	S	M	D	G	D	S	A	P	L
Query Conservation										.	.																																		.	.	.	.
Alig confidence										.	.																																		.	.	.	.																																	.
Template Conservation																																																																																	.
Template Sequence		A	V	P	L	N	L	I	G	L	K	A	G	R	C	A	D	Y	V	V	T	G	A	W	S	A	K	A	A	E	E	A	K	K	F	G	T	I	N	I	V	H	P	K	L	G	S	Y	T	K	I	P	D	P	S	T	W	N	L	N	P	D	A	S	Y	V	Y	Y	C	A	N	E	T	V	H	G	V	E	F	D	.
Template Known Secondary structure								G	G	G	S	T	T									S											T	T	T	S						S				S	S	S		S				G	G	G					T	T		S						S			T	T	T	T				S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																																									.																						.	.	.
Query SS confidence																																																									.																						.	.	.
Query Sequence		A	E	I	Q	Q	V	T	Q	Q	H	N	G	W	L	M	V	D	D	A	H	G	T	G	V	I	G	E	Q	G	R	G	S	C	W	L	Q	K	V	K	P	E	L	L	V	V	T	F	G	K	G	F	G	V	S	G	.	A	A	V	L	C	S	S	T	V	A	D	Y	L	L	Q	F	A	R	H	L	I	.	.	.
Query Conservation																																																									.																						.	.	.
Alig confidence		.	.	.	.																											.	.	.	.	.	.	.	.																		.																						.	.	.
Template Conservation		.	.	.	.																											.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	F	I	P	D	V	K	G	A	V	L	V	C	D	M	S	S	N	F	L	S	K	P	V	D	V	S	.	.	.	.	.	.	.	.	K	F	G	V	I	F	A	G	A	Q	K	N	V	G	S	A	G	V	T	V	V	I	V	R	D	D	L	L	G	F	A	L	R	E	C	P	S	V	L	E	Y	K
Template Known Secondary structure		.	.	.	.	S					T	T								T	T	T	T	T	S	S				G	G	.	.	.	.	.	.	.	.	G		S						G	G	G	T	T	S		T	T								T	T	S		S				T	T	S		G	G	G
Template Predicted Secondary structure		.	.	.	.																											.	.	.	.	.	.	.	.
Template SS confidence
						164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.									190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
									264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.							.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																								.																															.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																								.																															.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	Y	S	T	S	M	P	P	A	Q	A	Q	A	L	R	A	S	L	A	V	I	R	S	D	.	E	G	D	A	R	R	E	K	L	A	A	L	I	T	R	F	R	A	G	V	Q	D	L	P	F	T	L	A	D	S	.	.	.	.	.	.	C	S	A	I	Q	P	L	I	V	G	D	N	S
Query Conservation		.	.	.	.	.	.	.																								.																															.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																								.																															.	.	.	.	.	.
Template Conservation
Template Sequence		V	Q	A	G	N	S	S	L	Y	N	T	P	P	C	F	S	I	Y	V	M	G	L	V	L	E	W	I	K	N	N	G	G	A	A	A	M	E	K	L	S	S	I	K	S	Q	T	I	Y	E	I	I	D	N	S	Q	G	F	Y	V	C	P	V	E	P	Q	N	R	S	K	M	N	I	P	F	R	I	G	N	A	K
Template Known Secondary structure					T	T	T	T		S	S																				T	T																						T	S	T	T	S					S		G	G	G	B		S	S							S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		330	.					.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		R	A	.	.	.	.	L	Q	L	A	E	K	L	R	Q	Q	G	C	W	V	T	A	I	R	P	P	T	V	P	A	G	T	A	R	L	R	L	T	L	T	A	A	H	E	M	Q	D	I	D	R	L	L	E	V	L	H	G
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.																			.	.	.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		G	D	D	A	L	E	K	R	F	L	D	K	A	L	E	L	N	M	L	S	L	K	G	H	.	.	.	.	.	R	S	V	G	G	I	R	A	S	L	Y	N	A	V	T	I	E	D	V	Q	K	L	A	A	F	M	K	K
Template Known Secondary structure																	T	T			S		B			.	.	.	.	.	T	T	T		S							T	T	S
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.						.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions