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Job DescriptionP12998
Confidence100.00%DateWed Jan 25 15:20:38 GMT 2012
Rank19Aligned Residues350
% Identity19%Templatec3a8uX_
PDB info PDB header:transferaseChain: X: PDB Molecule:omega-amino acid--pyruvate aminotransferase; PDBTitle: crystal structure of omega-amino acid:pyruvate aminotransferase
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LRRRYPVAQGAGRWL. VADDRQYLNFSSN. . . DYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAE
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Template Sequence  LRDPRLIVAAEGSWLVDDKGRKVYDSLSGLWTCGAGH. TRKEIQEAVAKQLSTLDYSPG. . . . FQYGHPLSFQLAEKITD
Template Known Secondary structure  S


BTTT

TTT
TT
B.S
TTT
S


S....SS


T
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   30.........40.........50.........60...... ...70.........80....... ..90.........100....
 
   96. ..100.........110......... 120.........130.........140.....
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Query Sequence  WL. . GYSRALLFISGFAANQAVIAAM. . . . . . . . . MAKEDRIAADRLSHASLLEAASLSPS. . . . . . . . . . . . . . . . . . .
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Template Sequence  LTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPH
Template Known Secondary structure  TSSTTSSTT
TT

TT



SS


TTT


S
S

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   105....110.........120.........130.........140.........150.........160.........170.........180....
 
   146...150.........160...... ...170.........180...... ...190.........200.........
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Query Sequence  . . . . . . . . . . . QLRRFAHNDVTHLARLLASPC. PGQQMVVTEGVFSMDGDSAP. . . . LAEIQQVTQQHNGWLMVDDAHGT
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Template Sequence  TLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVIT.
Template Known Secondary structure 


GGGTT
SSS
SSS
GGG
SSBTTTT
B


TTT

TTT.
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   185....190.........200.........210.........220.........230.........240.........250.........260...
 
   210.........220.........230......... 240.........250.........260... ......270.........280....
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Query Sequence  GVIGEQGRGSCWLQKVKPELLVVTFGKGFG. VSGAAVLCSSTVADYLLQFARHLI. . . . YSTSMPPAQAQALRASLAVIR
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Template Sequence  GFGRTGSMFGADSFGVTPDLMCIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALC
Template Known Secondary structure  TTTTTSSSST


S
GGGGTTSS

T
SS
TTS
SS



TTTT
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   264.....270.........280.........290.........300.........310.........320.........330.........340...
 
   285....290.........300......... 310.........320......... 330.........340.........350.....
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Query Sequence  SDEGDARREKLAALITRFRAGVQDL. . . . PFTLADSCSAIQPLIVGDNS. . . . . RALQLAEKLRQQGCWVTAIRPPTVPA
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Template Sequence  LLQKENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG. . . . . .
Template Known Secondary structure  TTTTTTSTTTT

BTTBSST
T......
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   344.....350.........360.........370.........380.........390.........400.........410.......
 
   356...360.........370.........380...
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Query Sequence  GTARLRLTLTAAHEMQDIDRLLEVLHGN
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Template Sequence  . . DTLQFGPTFNSKPQDLDRLFDAVGEV
Template Known Secondary structure  ..T


TT

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   418.420.........430.........440...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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